Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20dorsalis_20[refseq_20GCF_5F000789215.1_202014-12-03]
7,166 sequences; 414,984,608 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq7155 192 6e-44
seq7156 143 3e-29
seq7104 111 2e-19
seq3141 89.7 5e-13
>seq7155
Length=3116674
Score = 192 bits (212), Expect = 6e-44
Identities = 475/719 (66%), Gaps = 4/719 (1%)
Strand=Plus/Plus
Query 132711 CAGGTCGACGAGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATGGTTTCGCAATT 132770
||| ||||| |||| | || ||||| || ||||| || | ||||| || ||||||
Sbjct 2758576 CAGCTCGACAAGCAAACGATCAGCCACAAATTCGATATAATCGGACATTAGTTTGCAATT 2758635
Query 132771 AAGTCCCAGCAGACGCACCGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACCGC 132830
| || | | | |||||||| || || || | || ||||| || || ||
Sbjct 2758636 CATACCGATTAAATTCACCGGCAAAGCGTCAGTTAAGAATTCCTGCTCAATTTTAACAGC 2758695
Query 132831 GTCGGTGACGATTTCCCTAACGCGCGCCGCGCTCGGCCGTTGCACCAAATGCTTGAACAT 132890
|| | | ||||| || ||| | || || ||| | ||||| | ||||||
Sbjct 2758696 TTCAGAAATTATTTCAACAATACGCTCATTACTTGGTTTTTGTATTAAATGTTGGAACAT 2758755
Query 132891 CAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGT 132950
||| || || ||||| ||||| | ||||| || | ||||| ||||| ||| || ||
Sbjct 2758756 CAAACATGCGAAGTCACAATGAAGTCCCTCATCTCGTGAAATTAGTTCATTGGAAAATGT 2758815
Query 132951 CAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAA 133010
|||||| ||||| | || ||||| || ||||| || || | || |||||||| ||
Sbjct 2758816 CAAGCCTGGCATTAAACCACGTTTCTTAAGCCAGAAGATCGAAGCAAAACTGCCACTGAA 2758875
Query 133011 GAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCT 133070
||||| || || ||||| || || || | | || || || || ||||| ||
Sbjct 2758876 GAAGATACCTTCAACGGCAGCAAATGCAATTACACGTTCACCAAAGTTGGCTGACTTCGA 2758935
Query 133071 GGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGC 133130
|| ||||| |||||||| || ||||| || ||| ||||| || || || ||
Sbjct 2758936 GGAAATCCAAGCAAGCGCCCAATCTGCCTTGCGCTTTACGGCAGGCATTGTCTCTATAGC 2758995
Query 133131 GTTCAACAAACGGAGTTTCTCT--TCCGAGGAACGCACGTAGGTGTCGATGAGGGTCGAA 133188
|| || || | | || || | | |||| | || || || || | | |
Sbjct 2758996 ATTGAATAA--GTAATTCCTTTGTTTCGAGTCCTTAATATATGTATCAATTAATATGCTA 2759053
Query 133189 TACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCG 133248
|||||||| || || || |||||||| || |||||||| || || ||||| || |||||
Sbjct 2759054 TACATTTCAGAATGCACATTCTCCATCGCAATTTGAAATCCATAGAAGCAACGTGCCTCT 2759113
Query 133249 ACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTG 133308
||| || ||||| || |||||| || || | |||||| || || || || ||
Sbjct 2759114 GTCACTTGGACTTCCTGGCAGAAACGTTCAACTACATTTTCATTCACAATACCATCAGAT 2759173
Query 133309 GCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCGCTCC 133368
|||||||||||||| | |||||| || ||||| || || || || | | || ||
Sbjct 2759174 GCGGCGAAAAAGGCTAACACGTGTGAAATAAAATGTCGTTCATTATCAGTGAGACGTGCC 2759233
Query 133369 CAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGC 133427
|| || | | || || || || || || ||||| || ||||| ||||| || || ||
Sbjct 2759234 CAATCATCCATATCTTTAGAAAGATCTACTTCCTCTACTGTCCAGAACGATGCTTCTGC 2759292
>seq7156
Length=3407544
Score = 143 bits (158), Expect = 3e-29
Identities = 163/219 (74%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300
|||||||| || ||||| ||||| | || || || ||||||||| | || |||||| |
Sbjct 1526737 AAAATGCAGATTTTCGTCAAAACCTTAACTGGTAAGACCATCACCTTAGAGGTCGAGCCT 1526678
Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360
| |||| | | ||| | |||| ||||||| ||||||||||| || ||| | ||
Sbjct 1526677 TCTGACACCATCGAAAATGTCAAAGCTAAAATCCAAGACAAAGAGGGTATCCCCCCAGAT 1526618
Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420
|||||||| | || | ||| || ||||| |||| || | |||||| | |||||||
Sbjct 1526617 CAACAGCGTTTGATCTTCGCCGGAAAACAATTGGAAGATGGTCGCACCTTGTCCGACTAC 1526558
Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
|||||||||||||| | || || |||||||| ||||||
Sbjct 1526557 AACATCCAAAAGGAGTCAACCCTCCATTTGGTTCTGCGT 1526519
>seq7104
Length=1453772
Score = 111 bits (122), Expect = 2e-19
Identities = 156/219 (71%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300
||||||||||| ||||| || || | || ||||| |||||||| | || || || |
Sbjct 421934 AAAATGCAAATCTTCGTGAAGACCTTGACTGGCAAGACCATCACTCTGGAGGTTGAACCA 421993
Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360
|||| | | ||| |||||| || || | |||||||| ||||| ||| | ||
Sbjct 421994 TCCGATACTATTGAAAATGTTAAAGCTAAGATTCAAGACAAAGAAGGAATCCCCCCAGAT 422053
Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420
||||| || | || | || || ||||| ||||| |||| ||||| || ||| |||
Sbjct 422054 CAACAACGTTTAATCTTTGCCGGTAAACAACTGGAAGACGGACGCACTCTGTCCGATTAC 422113
Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
|||||||| ||||| | || || |||||||| || |||
Sbjct 422114 AACATCCAGAAGGAGTCTACACTTCATTTGGTTCTTCGT 422152
Score = 100 bits (110), Expect = 3e-16
Identities = 153/218 (70%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| ||||| | ||||| ||||||||||| | || || ||| | ||
Sbjct 422165 ATGCAGATTTTCGTCAAAACTTTGACGGGAAAAACCATCACTTTGGAGGTTGAGCCTTCC 422224
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|| | | | | | |||| ||||| | || || || ||||| ||| | || |||
Sbjct 422225 GATACAATTGAGAATGTCAAAGCTAAAATTCAAGATAAGGAAGGAATCCCCCCAGATCAA 422284
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
|| || | |||| ||| ||||||||| |||| || | ||||| || |||||| ||
Sbjct 422285 CAACGTTTGATTTTCGCTGGCAAACAGTTGGAGGATGGACGCACACTGTCCGACTATAAT 422344
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTT 38461
|| || |||||| | || || ||||| || || || ||
Sbjct 422345 ATTCAGAAGGAATCCACTCTACATTTAGTTCTACGCTT 422382
>seq3141
Length=2848
Score = 89.7 bits (98), Expect = 5e-13
Identities = 157/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302
||||||||| ||||||||||| || ||||| || |||||||| | || || ||| | |
Sbjct 1343 AATGCAAATTTTCGTAAAAACCCTTACGGGTAAGACCATCACTCTTGAGGTTGAGCCTTC 1402
Query 38303 CGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|| | | || |||| ||||| | || || || |||||||| | || ||
Sbjct 1403 GGATACTATTGAACATGTTAAGTCCAAAATTCAAGATAAGGAAGGAATTCCGCCTGATCA 1462
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
|||||| || |||| ||| || || || |||| || | ||||| | ||||| ||
Sbjct 1463 ACAGCGTCTAATTTTCGCCGGAAAGCAATTGGAAGATGGTCGCACATTGGCTGACTATAA 1522
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471
|| || || || | || ||||||| || || ||| | ||||| |||
Sbjct 1523 TATTCAGAAAGAGTCTACATTGCATTTAGTACTTCGTCTTAGAGGTGGC 1571
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500127997021440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |