Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20dorsalis_20[refseq_20GCF_5F000789215.1_202014-12-03] 7,166 sequences; 414,984,608 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq7084 104 3e-17 >seq7084 Length=1258986 Score = 104 bits (114), Expect = 3e-17 Identities = 366/564 (65%), Gaps = 11/564 (2%) Strand=Plus/Plus Query 110571 CTTGTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTC 110630 ||||| ||||| | || ||||| | | || | | || || | ||||| || || || Sbjct 2504 CTTGTGTGGACACATTAGCGACCAGTCTTCATCGGCTTCTACACGTTTCATAAATAGATC 2563 Query 110631 AGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAG 110690 ||| ||||||| || |||| | || | | |||| |||||| | ||| ||| Sbjct 2564 AGGTATCCACAAGGCATAGAACAAATCTCTGGCACGATGCTCTTCTTTACCAGTGTTTTT 2623 Query 110691 GCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGA 110750 | |||||||| || | ||||| | |||||||||||||| |||| || | || Sbjct 2624 CTTCAAATCCAAAAATTCGAAAATATCAGCATGCCATGGTTCGAGGTAGATGGCAAAGGC 2683 Query 110751 TCCCTTACGACGACC---CGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAG 110807 || || ||| | | || | |||||||||||| | |||||| || | | Sbjct 2684 GCCGGGCCGTTTACCGCACCCTTGATCCACATAGCGTGCTATATTATTGAACACTCGCAA 2743 Query 110808 CATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATT-CTGGACTTATTGGCAC 110866 |||||| | | |||| |||| | |||||||||| |||| | | | | ||| | | Sbjct 2744 CATAGGCACCAAACCATTTGATTTGCTATTTGTACCCGCAATTGCAGTGCCTTTTG-CGC 2802 Query 110867 GAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCACACTC-T 110925 | ||| || | | || ||||||||| || || | || ||| |||||| | | Sbjct 2803 GTATGCAATGTACGTTCAGACCAATACCGCCAGCAGATTTGGAAATCAATGCACATTGAT 2862 Query 110926 GTG-AG-TGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAG 110983 ||| || ||| ||||||||||||| ||||| || ||| | ||||||||| | Sbjct 2863 GTGCAGATGTGA---AAATACCATCAATGGAATCGTCCACCATGGTCAGTAGAAAGCATG 2919 Query 110984 AAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACA 111043 | |||| || || | || | ||| ||| || || || | ||||| | || Sbjct 2920 ATGACAATTGCGGCTGCTTAGTGGCAGCAGCGAAAAGCGTTGGAGAAGCATGTGTAAAAT 2979 Query 111044 GACCTTGGGACATCTTGTTGTATGTGTCGAGTGCGGAGGGTACATCTTTACCGTGAATAC 111103 || || ||| | | |||||| || |||| ||| | | |||| || || |||| Sbjct 2980 AACGTTCGGAAAGCAAGTTGTAAGTTTCGATTGCTGCATCGATGTCTTCGCCATGTATAC 3039 Query 111104 CAATGGCAACTCGCATGAACATAT 111127 | |||||||| ||||| ||||||| Sbjct 3040 CGATGGCAACACGCATTAACATAT 3063 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588923242474800