Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20dorsalis_20[refseq_20GCF_5F000789215.1_202014-12-03]
7,166 sequences; 414,984,608 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq7084 104 3e-17
>seq7084
Length=1258986
Score = 104 bits (114), Expect = 3e-17
Identities = 366/564 (65%), Gaps = 11/564 (2%)
Strand=Plus/Plus
Query 110571 CTTGTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTC 110630
||||| ||||| | || ||||| | | || | | || || | ||||| || || ||
Sbjct 2504 CTTGTGTGGACACATTAGCGACCAGTCTTCATCGGCTTCTACACGTTTCATAAATAGATC 2563
Query 110631 AGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAG 110690
||| ||||||| || |||| | || | | |||| |||||| | ||| |||
Sbjct 2564 AGGTATCCACAAGGCATAGAACAAATCTCTGGCACGATGCTCTTCTTTACCAGTGTTTTT 2623
Query 110691 GCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGA 110750
| |||||||| || | ||||| | |||||||||||||| |||| || | ||
Sbjct 2624 CTTCAAATCCAAAAATTCGAAAATATCAGCATGCCATGGTTCGAGGTAGATGGCAAAGGC 2683
Query 110751 TCCCTTACGACGACC---CGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAG 110807
|| || ||| | | || | |||||||||||| | |||||| || | |
Sbjct 2684 GCCGGGCCGTTTACCGCACCCTTGATCCACATAGCGTGCTATATTATTGAACACTCGCAA 2743
Query 110808 CATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATT-CTGGACTTATTGGCAC 110866
|||||| | | |||| |||| | |||||||||| |||| | | | | ||| | |
Sbjct 2744 CATAGGCACCAAACCATTTGATTTGCTATTTGTACCCGCAATTGCAGTGCCTTTTG-CGC 2802
Query 110867 GAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCACACTC-T 110925
| ||| || | | || ||||||||| || || | || ||| |||||| | |
Sbjct 2803 GTATGCAATGTACGTTCAGACCAATACCGCCAGCAGATTTGGAAATCAATGCACATTGAT 2862
Query 110926 GTG-AG-TGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAG 110983
||| || ||| ||||||||||||| ||||| || ||| | ||||||||| |
Sbjct 2863 GTGCAGATGTGA---AAATACCATCAATGGAATCGTCCACCATGGTCAGTAGAAAGCATG 2919
Query 110984 AAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACA 111043
| |||| || || | || | ||| ||| || || || | ||||| | ||
Sbjct 2920 ATGACAATTGCGGCTGCTTAGTGGCAGCAGCGAAAAGCGTTGGAGAAGCATGTGTAAAAT 2979
Query 111044 GACCTTGGGACATCTTGTTGTATGTGTCGAGTGCGGAGGGTACATCTTTACCGTGAATAC 111103
|| || ||| | | |||||| || |||| ||| | | |||| || || ||||
Sbjct 2980 AACGTTCGGAAAGCAAGTTGTAAGTTTCGATTGCTGCATCGATGTCTTCGCCATGTATAC 3039
Query 111104 CAATGGCAACTCGCATGAACATAT 111127
| |||||||| ||||| |||||||
Sbjct 3040 CGATGGCAACACGCATTAACATAT 3063
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588923242474800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |