Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20dorsalis_20[refseq_20GCF_5F000789215.1_202014-12-03] 7,166 sequences; 414,984,608 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq7075 84.2 3e-11 >seq7075 Length=1193090 Score = 84.2 bits (92), Expect = 3e-11 Identities = 167/244 (68%), Gaps = 4/244 (2%) Strand=Plus/Plus Query 154864 TGTCATGTATTATGATTACATACCCATCTACACATGGTGTATTTGAAACTAACATTAGAC 154923 |||| ||| | ||||| || || ||||| ||| ||||||||||| | | ||| | Sbjct 496640 TGTCGTGTCTGATGATCACCTATCCATCCACAATGGGTGTATTTGAGGAGA-CTGTAG-C 496697 Query 154924 AGATATGTAAGATCG--TTCATGACAATGGTGGTCAGGTATATCTTGATGGAGCAAATCT 154981 ||||| | |||| | || | |||| || || ||||| | || || || ||| | Sbjct 496698 TGATATATGCGATCTGATCCACAAACATGGCGGACAAGTATACTTGGACGGCGCTAATAT 496757 Query 154982 AAATGCACAGGTAGGACTAGCAAAACCATGTGAGTATGGTGCAGATGTATGTCATCTAAA 155041 ||||||||||| || ||| || | || ||||| ||||| | ||| | || Sbjct 496758 GAATGCACAGGTGGGTCTATGTCGTCCCGGCGATTATGGCAGTGATGTCTCTCACTTGAA 496817 Query 155042 CTTACATAAAACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATAGG 155101 |||| || || ||||| || |||||||| ||||| || ||||| | |||||||| || Sbjct 496818 TCTACACAAGACTTTCTGCATACCACATGGTGGTGGCGGCCCTGGTATGGGTCCTATTGG 496877 Query 155102 TGTA 155105 ||| Sbjct 496878 CGTA 496881 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579160917013440