Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20dorsalis_20[refseq_20GCF_5F000789215.1_202014-12-03] 7,166 sequences; 414,984,608 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq7075 102 1e-16 >seq7075 Length=1193090 Score = 102 bits (112), Expect = 1e-16 Identities = 172/244 (70%), Gaps = 4/244 (2%) Strand=Plus/Plus Query 159539 TGTCATGTATTATGATTACATATCCATCTACACATGGTGTATTTGAAACAAACATCAGAC 159598 |||| ||| | ||||| || |||||||| ||| ||||||||||| | || || | Sbjct 496640 TGTCGTGTCTGATGATCACCTATCCATCCACAATGGGTGTATTTGAGG-AGACTGTAG-C 496697 Query 159599 AGATATGTAAGAT-TGTTCATGAGA-ATGGTGGTCAGGTATATCTTGATGGTGCAAATCT 159656 ||||| | ||| || || | | |||| || || ||||| | || || || ||| | Sbjct 496698 TGATATATGCGATCTGATCCACAAACATGGCGGACAAGTATACTTGGACGGCGCTAATAT 496757 Query 159657 AAATGCACAGGTAGGTCTAGCAAAACCATGTGACTATGGTGCAGATGTATGTCATCTAAA 159716 ||||||||||| |||||| || | || ||||| ||||| | ||| | || Sbjct 496758 GAATGCACAGGTGGGTCTATGTCGTCCCGGCGATTATGGCAGTGATGTCTCTCACTTGAA 496817 Query 159717 CTTACATAAGACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGG 159776 |||| ||||| ||||| || |||||||| ||||| || ||||| | ||||||||||| Sbjct 496818 TCTACACAAGACTTTCTGCATACCACATGGTGGTGGCGGCCCTGGTATGGGTCCTATTGG 496877 Query 159777 TGTA 159780 ||| Sbjct 496878 CGTA 496881 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 587998525313760