Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20dorsalis_20[refseq_20GCF_5F000789215.1_202014-12-03] 7,166 sequences; 414,984,608 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq7104 89.7 3e-13 >seq7104 Length=1453772 Score = 89.7 bits (98), Expect = 3e-13 Identities = 148/212 (70%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831 ||| || || | ||| ||| |||||||| |||||||| || || | ||| |||| || Sbjct 422374 AACTAAATGTAGAGTGGATTCCTTCTGAATATTATAGTCGGACAGTGTGCGTCCATCCTC 422315 Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891 || |||||| || || || || | ||||| || ||| | || | || ||||| || Sbjct 422314 CAACTGTTTGCCAGCGAAAATCAAACGTTGTTGATCTGGGGGGATTCCTTCCTTATCTTG 422255 Query 34892 AATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTT 34949 ||| || |||||| || || || | || | |||||| || | || |||||| Sbjct 422254 AATTTTAGCTTTGAC--ATTCTCAATTGTATCGGAAGGCTCAACCTCCAAAGTGATGGTT 422197 Query 34950 TTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 |||||||| | ||| || || || |||||||| Sbjct 422196 TTTCCCGTCAAAGTTTTGACGAAAATCTGCAT 422165 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324605247921648