Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20dorsalis_20[refseq_20GCF_5F000789215.1_202014-12-03]
7,166 sequences; 414,984,608 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq7104 89.7 3e-13
>seq7104
Length=1453772
Score = 89.7 bits (98), Expect = 3e-13
Identities = 148/212 (70%), Gaps = 4/212 (2%)
Strand=Plus/Minus
Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831
||| || || | ||| ||| |||||||| |||||||| || || | ||| |||| ||
Sbjct 422374 AACTAAATGTAGAGTGGATTCCTTCTGAATATTATAGTCGGACAGTGTGCGTCCATCCTC 422315
Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891
|| |||||| || || || || | ||||| || ||| | || | || ||||| ||
Sbjct 422314 CAACTGTTTGCCAGCGAAAATCAAACGTTGTTGATCTGGGGGGATTCCTTCCTTATCTTG 422255
Query 34892 AATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTT 34949
||| || |||||| || || || | || | |||||| || | || ||||||
Sbjct 422254 AATTTTAGCTTTGAC--ATTCTCAATTGTATCGGAAGGCTCAACCTCCAAAGTGATGGTT 422197
Query 34950 TTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
|||||||| | ||| || || || ||||||||
Sbjct 422196 TTTCCCGTCAAAGTTTTGACGAAAATCTGCAT 422165
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 324605247921648
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |