Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20dorsalis_20[refseq_20GCF_5F000789215.1_202014-12-03]
7,166 sequences; 414,984,608 total letters
Query= NC_016924.1
Length=185139
Score E
Sequences producing significant alignments: (Bits) Value
seq7155 208 9e-49
>seq7155
Length=3116674
Score = 208 bits (230), Expect = 9e-49
Identities = 466/691 (67%), Gaps = 8/691 (1%)
Strand=Plus/Plus
Query 37010 ATCCGCAACAAATTCTATGTATTTACACATTAGTTCATAGTTTATACCAATTAGTTTTAC 37069
||| || |||||||| || || | ||||||||| | || ||||| |||| || ||
Sbjct 2758594 ATCAGCCACAAATTCGATATAATCGGACATTAGTTTGCAATTCATACCGATTAAATTCAC 2758653
Query 37070 TGGAATTGCATCT-TGAAGAAATAGTTTTTCTATTATTACAGCATCTTTAACTATATTAA 37128
|| | || || | ||||| | | | | ||| | ||||| || || ||| | ||
Sbjct 2758654 CGGCAAAGCGTCAGTTAAGAATTCCTGCT-CAATTTTAACAGCTTCAGAAATTATTTCAA 2758712
Query 37129 CAATAACTTCTTCAGTTGGGGGATATTTTAAATATTTAAACAATAAACATGCAAAATCAC 37188
||||| || | | |||| | | |||||| || |||| |||||||| || ||||
Sbjct 2758713 CAATACGCTCATTACTTGGTTTTTGTATTAAATGTTGGAACATCAAACATGCGAAGTCAC 2758772
Query 37189 AATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGCATTAAAC 37248
|||| | || ||||||| || | |||||| ||||| || || |||||||||||||
Sbjct 2758773 AATGAAGTCCCTCATCTCGTGAAATTAGTTCATTGGAAAATGTCAAGCCTGGCATTAAAC 2758832
Query 37249 CTCtttttttAATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACCTTCAACTG 37308
| | ||| |||| ||| || || | |||||| ||| ||||| ||||||||||| |
Sbjct 2758833 CACGTTTCTTAAGCCAGAAGATCGAAGCAAAACTGCCACTGAAGAAGATACCTTCAACGG 2758892
Query 37309 CTGCAAATGCTACAAGACGTGTACCGAAAGTTGAACTATAATC--AGAAATCCAtttttt 37366
| |||||||| | | |||| ||| ||||||| || || ||||||||
Sbjct 2758893 CAGCAAATGCAATTACACGTTCACC-AAAGTTG-GCTGACTTCGAGGAAATCCAAGCAAG 2758950
Query 37367 tGTCCAATCTGCCTT-TAATTTAACACATTCAATTGTTTCAATTGCTTTTAAGAGAAAGt 37425
| |||||||||||| |||| || | ||||| || || || || || | | |
Sbjct 2758951 CGCCCAATCTGCCTTGCGCTTTACGGCAGGC-ATTGTCTCTATAGCATTGAATAAGTAAT 2759009
Query 37426 ttttttCTTCACTATCTGTTATATAAGTATCAATTAGTAAACTATACATTTCAGAGTGAA 37485
| ||| || || | ||||| |||||||||| || |||||||||||||| || |
Sbjct 2759010 TCCTTTGTTTCGAGTCCTTAATATATGTATCAATTAATATGCTATACATTTCAGAATGCA 2759069
Query 37486 TATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAGCTTCAGATAATTGAACATCGT 37545
||| || || || || ||||| ||||| || || | || || | | ||| || || |
Sbjct 2759070 CATTCTCCATCGCAATTTGAAATCCATAGAAGCAACGTGCCTCTGTCACTTGGACTTCCT 2759129
Query 37546 TAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCACTAGCTGCAAAGAAAGCAA 37605
| || | | | ||| |||||||| || || |||||| || || || || || |
Sbjct 2759130 GGCAGAAACGTTCAACTACATTTTCATTCACAATACCATCAGATGCGGCGAAAAAGGCTA 2759189
Query 37606 GAACATATTTTATAAAATGTCTTTCATCATTTGATAATTTTTTCCAATCATTAATATCTT 37665
|| | | |||||||||| ||||| || | | | |||||||| |||||||
Sbjct 2759190 ACACGTGTGAAATAAAATGTCGTTCATTATCAGTGAGACGTGCCCAATCATCCATATCTT 2759249
Query 37666 TTGATAAATCAACTTCATCAACGGTCCAAAA 37696
| || | ||| ||||| || || ||||| ||
Sbjct 2759250 TAGAAAGATCTACTTCCTCTACTGTCCAGAA 2759280
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 592263743222640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |