Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20dorsalis_20[refseq_20GCF_5F000789215.1_202014-12-03] 7,166 sequences; 414,984,608 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq7155 208 9e-49 >seq7155 Length=3116674 Score = 208 bits (230), Expect = 9e-49 Identities = 466/691 (67%), Gaps = 8/691 (1%) Strand=Plus/Plus Query 37010 ATCCGCAACAAATTCTATGTATTTACACATTAGTTCATAGTTTATACCAATTAGTTTTAC 37069 ||| || |||||||| || || | ||||||||| | || ||||| |||| || || Sbjct 2758594 ATCAGCCACAAATTCGATATAATCGGACATTAGTTTGCAATTCATACCGATTAAATTCAC 2758653 Query 37070 TGGAATTGCATCT-TGAAGAAATAGTTTTTCTATTATTACAGCATCTTTAACTATATTAA 37128 || | || || | ||||| | | | | ||| | ||||| || || ||| | || Sbjct 2758654 CGGCAAAGCGTCAGTTAAGAATTCCTGCT-CAATTTTAACAGCTTCAGAAATTATTTCAA 2758712 Query 37129 CAATAACTTCTTCAGTTGGGGGATATTTTAAATATTTAAACAATAAACATGCAAAATCAC 37188 ||||| || | | |||| | | |||||| || |||| |||||||| || |||| Sbjct 2758713 CAATACGCTCATTACTTGGTTTTTGTATTAAATGTTGGAACATCAAACATGCGAAGTCAC 2758772 Query 37189 AATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGCATTAAAC 37248 |||| | || ||||||| || | |||||| ||||| || || ||||||||||||| Sbjct 2758773 AATGAAGTCCCTCATCTCGTGAAATTAGTTCATTGGAAAATGTCAAGCCTGGCATTAAAC 2758832 Query 37249 CTCtttttttAATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACCTTCAACTG 37308 | | ||| |||| ||| || || | |||||| ||| ||||| ||||||||||| | Sbjct 2758833 CACGTTTCTTAAGCCAGAAGATCGAAGCAAAACTGCCACTGAAGAAGATACCTTCAACGG 2758892 Query 37309 CTGCAAATGCTACAAGACGTGTACCGAAAGTTGAACTATAATC--AGAAATCCAtttttt 37366 | |||||||| | | |||| ||| ||||||| || || |||||||| Sbjct 2758893 CAGCAAATGCAATTACACGTTCACC-AAAGTTG-GCTGACTTCGAGGAAATCCAAGCAAG 2758950 Query 37367 tGTCCAATCTGCCTT-TAATTTAACACATTCAATTGTTTCAATTGCTTTTAAGAGAAAGt 37425 | |||||||||||| |||| || | ||||| || || || || || | | | Sbjct 2758951 CGCCCAATCTGCCTTGCGCTTTACGGCAGGC-ATTGTCTCTATAGCATTGAATAAGTAAT 2759009 Query 37426 ttttttCTTCACTATCTGTTATATAAGTATCAATTAGTAAACTATACATTTCAGAGTGAA 37485 | ||| || || | ||||| |||||||||| || |||||||||||||| || | Sbjct 2759010 TCCTTTGTTTCGAGTCCTTAATATATGTATCAATTAATATGCTATACATTTCAGAATGCA 2759069 Query 37486 TATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAGCTTCAGATAATTGAACATCGT 37545 ||| || || || || ||||| ||||| || || | || || | | ||| || || | Sbjct 2759070 CATTCTCCATCGCAATTTGAAATCCATAGAAGCAACGTGCCTCTGTCACTTGGACTTCCT 2759129 Query 37546 TAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCACTAGCTGCAAAGAAAGCAA 37605 | || | | | ||| |||||||| || || |||||| || || || || || | Sbjct 2759130 GGCAGAAACGTTCAACTACATTTTCATTCACAATACCATCAGATGCGGCGAAAAAGGCTA 2759189 Query 37606 GAACATATTTTATAAAATGTCTTTCATCATTTGATAATTTTTTCCAATCATTAATATCTT 37665 || | | |||||||||| ||||| || | | | |||||||| ||||||| Sbjct 2759190 ACACGTGTGAAATAAAATGTCGTTCATTATCAGTGAGACGTGCCCAATCATCCATATCTT 2759249 Query 37666 TTGATAAATCAACTTCATCAACGGTCCAAAA 37696 | || | ||| ||||| || || ||||| || Sbjct 2759250 TAGAAAGATCTACTTCCTCTACTGTCCAGAA 2759280 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592263743222640