Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20dorsalis_20[refseq_20GCF_5F000789215.1_202014-12-03] 7,166 sequences; 414,984,608 total letters Query= NC_019515.1 Length=93839 Score E Sequences producing significant alignments: (Bits) Value seq7133 84.2 1e-11 >seq7133 Length=2056560 Score = 84.2 bits (92), Expect = 1e-11 Identities = 173/254 (68%), Gaps = 5/254 (2%) Strand=Plus/Minus Query 78363 ATATGATTCTTGTAAATATGAGCGTCACCGATTGTGTGAATGAAGTCTCCTACTTCCAG- 78421 |||||||| || || | ||| || || || | ||||| | ||| || ||| | || Sbjct 1569229 ATATGATTATTATAGACATGTGCATCGCCCAAAGTGTGGACGAAATCCCCTGGTCGGAGA 1569170 Query 78422 TCCGCACAAATGCGCAATAATATGTGTAAGTAATGCGTATGAAGCAATGTTAAATGGAAT 78481 || | | | ||| ||||| |||| ||||| || ||||| || ||||| |||||||| | Sbjct 1569169 TCAGTA-ATATGAGCAATCATATAGGTAAGCAAAGCGTACGAGGCAATATTAAATGGTAC 1569111 Query 78482 TCCTAAGAATACGTCACCGCTTCGTTGGTACAATTGGCAACTTAGCTTTCCATCAACTGA 78541 || || | || | || |||||||| ||||| ||| || || ||||| | Sbjct 1569110 ACCCAATCCCATATCGGCACTGCGTTGGTATAATTGACAAGATAACTCTCCATTGGCA-- 1569053 Query 78542 TACGTAAAACTGGAATAGAGTGTGACAAGGCGGTAGTGCCATATCATCTAAGTCAGCAGG 78601 || |||| || ||| |||||||| ||||| ||||| | | | || |||| Sbjct 1569052 -ACAAAAAATTGTGCAAGACAATGACAAGGTGGTAGAGCCATTTGAGGGATATCGACAGG 1568994 Query 78602 ATTCCAAGCAGACA 78615 |||||||||||||| Sbjct 1568993 ATTCCAAGCAGACA 1568980 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300133785338800