Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20dorsalis_20[refseq_20GCF_5F000789215.1_202014-12-03]
7,166 sequences; 414,984,608 total letters
Query= NC_019945.1
Length=132978
Score E
Sequences producing significant alignments: (Bits) Value
seq7156 104 2e-17
seq3141 82.4 6e-11
>seq7156
Length=3407544
Score = 104 bits (114), Expect = 2e-17
Identities = 150/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 28551 AAAATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCT 28610
|||||||| || || || ||||| ||||| ||||| ||||| ||| || || |||
Sbjct 1526737 AAAATGCAGATTTTCGTCAAAACCTTAACTGGTAAGACCATCACCTTAGAGGTCGAGCCT 1526678
Query 28611 TCAGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGAT 28670
|| || || | | || |||| |||||| ||||||||||| | ||| ||||
Sbjct 1526677 TCTGACACCATCGAAAATGTCAAAGCTAAAATCCAAGACAAAGAGGGTATCCCCCCAGAT 1526618
Query 28671 CAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTAT 28730
|||||| | | ||||| || || ||||||||||||||| | || || |||| ||
Sbjct 1526617 CAACAGCGTTTGATCTTCGCCGGAAAACAATTGGAAGATGGTCGCACCTTGTCCGACTAC 1526558
Query 28731 AACATTCAAAAAGAATCTACTCTGCACATGGT 28762
||||| ||||| || || || || || ||||
Sbjct 1526557 AACATCCAAAAGGAGTCAACCCTCCATTTGGT 1526526
>seq3141
Length=2848
Score = 82.4 bits (90), Expect = 6e-11
Identities = 147/215 (68%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 28542 GATTGTGTAAAAATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAA 28601
|||||| | ||||||||| || |||||||| | |||||||| ||||| || ||
Sbjct 1332 GATTGTTCAGCAATGCAAATTTTCGTAAAAACCCTTACGGGTAAGACCATCACTCTTGAG 1391
Query 28602 ACGGAACCTTCAGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTG 28661
|| ||||| || || | | || | ||| ||||| || || || ||| |
Sbjct 1392 GTTGAGCCTTCGGATACTATTGAACATGTTAAGTCCAAAATTCAAGATAAGGAAGGAATT 1451
Query 28662 CCCGTAGATCAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATG 28721
|| ||||||||| | || || || || || || |||||||||||| | || ||
Sbjct 1452 CCGCCTGATCAACAGCGTCTAATTTTCGCCGGAAAGCAATTGGAAGATGGTCGCACATTG 1511
Query 28722 GCCGATTATAACATTCAAAAAGAATCTACTCTGCA 28756
|| || ||||| ||||| ||||| ||||| ||||
Sbjct 1512 GCTGACTATAATATTCAGAAAGAGTCTACATTGCA 1546
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 425367647005914
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |