Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20dorsalis_20[refseq_20GCF_5F000789215.1_202014-12-03]
7,166 sequences; 414,984,608 total letters
Query= NC_020842.1
Length=79114
Score E
Sequences producing significant alignments: (Bits) Value
seq7084 104 1e-17
>seq7084
Length=1258986
Score = 104 bits (114), Expect = 1e-17
Identities = 153/214 (71%), Gaps = 2/214 (1%)
Strand=Plus/Plus
Query 25933 CATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTT 25992
|||||||| ||| || ||||||| ||||| || |||||||| || | ||||||||
Sbjct 2552 CATAAATAGATCAGGTATCCACAAGGCATAGAACAAATCTCTGGCACGATGCTCTTCTTT 2611
Query 25993 TCC-GTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAAT 26051
|| ||| || || || | ||| || || || |||||||| | ||||||||||| | |
Sbjct 2612 ACCAGTGTTT-TTCTTCAAATCCAAAAATTCGAAAATATCAGCATGCCATGGTTCGAGGT 2670
Query 26052 AGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCAT 26111
|||| ||||| || | ||| || | |||||||| || || | ||| | | ||
Sbjct 2671 AGATGGCAAAGGCGCCGGGCCGTTTACCGCACCCTTGATCCACATAGCGTGCTATATTAT 2730
Query 26112 TGAAAACTTTCAACATTGGAACTAATCCAGTTGA 26145
|||| ||| |||||| || || || ||| ||||
Sbjct 2731 TGAACACTCGCAACATAGGCACCAAACCATTTGA 2764
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 253017900593450
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |