Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20dorsalis_20[refseq_20GCF_5F000789215.1_202014-12-03] 7,166 sequences; 414,984,608 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq7084 104 1e-17 >seq7084 Length=1258986 Score = 104 bits (114), Expect = 1e-17 Identities = 153/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 25933 CATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTT 25992 |||||||| ||| || ||||||| ||||| || |||||||| || | |||||||| Sbjct 2552 CATAAATAGATCAGGTATCCACAAGGCATAGAACAAATCTCTGGCACGATGCTCTTCTTT 2611 Query 25993 TCC-GTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAAT 26051 || ||| || || || | ||| || || || |||||||| | ||||||||||| | | Sbjct 2612 ACCAGTGTTT-TTCTTCAAATCCAAAAATTCGAAAATATCAGCATGCCATGGTTCGAGGT 2670 Query 26052 AGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCAT 26111 |||| ||||| || | ||| || | |||||||| || || | ||| | | || Sbjct 2671 AGATGGCAAAGGCGCCGGGCCGTTTACCGCACCCTTGATCCACATAGCGTGCTATATTAT 2730 Query 26112 TGAAAACTTTCAACATTGGAACTAATCCAGTTGA 26145 |||| ||| |||||| || || || ||| |||| Sbjct 2731 TGAACACTCGCAACATAGGCACCAAACCATTTGA 2764 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253017900593450