Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20dorsalis_20[refseq_20GCF_5F000789215.1_202014-12-03]
7,166 sequences; 414,984,608 total letters
Query= NC_020845.1
Length=180977
Score E
Sequences producing significant alignments: (Bits) Value
seq7075 98.7 1e-15
>seq7075
Length=1193090
Score = 98.7 bits (108), Expect = 1e-15
Identities = 169/242 (70%), Gaps = 4/242 (2%)
Strand=Plus/Minus
Query 138182 TACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATG 138241
||| ||||||||||| | ||||| || ||||| |||||||| || ||||| ||||| ||
Sbjct 496881 TACGCCAATAGGACCCATACCAGGGCCGCCACCACCATGTGGTATGCAGAAAGTCTTGTG 496822
Query 138242 TAAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGC 138301
|| ||| | ||| | ||||| ||||| || | || |||||| ||||||||
Sbjct 496821 TAGATTCAAGTGAGAGACATCACTGCCATAATCGCCGGGACGACATAGACCCACCTGTGC 496762
Query 138302 ATTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAA--CGATCTTACAT 138359
||| | ||| || || || | ||||| || || |||| | || | |||| | ||
Sbjct 496761 ATTCATATTAGCGCCGTCCAAGTATACTTGTCCGCCATGTTTGTGGATCAGATCGCATAT 496702
Query 138360 ATCTGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCATAATACAT 138419
||| | || || | ||||||||||| || |||||||| || ||||| | |||
Sbjct 496701 ATCAG-CTACAGTCT-CCTCAAATACACCCATTGTGGATGGATAGGTGATCATCAGACAC 496644
Query 138420 GA 138421
||
Sbjct 496643 GA 496642
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 578946536218320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |