Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20dorsalis_20[refseq_20GCF_5F000789215.1_202014-12-03] 7,166 sequences; 414,984,608 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq7075 98.7 1e-15 >seq7075 Length=1193090 Score = 98.7 bits (108), Expect = 1e-15 Identities = 169/242 (70%), Gaps = 4/242 (2%) Strand=Plus/Minus Query 138182 TACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATG 138241 ||| ||||||||||| | ||||| || ||||| |||||||| || ||||| ||||| || Sbjct 496881 TACGCCAATAGGACCCATACCAGGGCCGCCACCACCATGTGGTATGCAGAAAGTCTTGTG 496822 Query 138242 TAAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGC 138301 || ||| | ||| | ||||| ||||| || | || |||||| |||||||| Sbjct 496821 TAGATTCAAGTGAGAGACATCACTGCCATAATCGCCGGGACGACATAGACCCACCTGTGC 496762 Query 138302 ATTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAA--CGATCTTACAT 138359 ||| | ||| || || || | ||||| || || |||| | || | |||| | || Sbjct 496761 ATTCATATTAGCGCCGTCCAAGTATACTTGTCCGCCATGTTTGTGGATCAGATCGCATAT 496702 Query 138360 ATCTGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCATAATACAT 138419 ||| | || || | ||||||||||| || |||||||| || ||||| | ||| Sbjct 496701 ATCAG-CTACAGTCT-CCTCAAATACACCCATTGTGGATGGATAGGTGATCATCAGACAC 496644 Query 138420 GA 138421 || Sbjct 496643 GA 496642 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578946536218320