Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20dorsalis_20[refseq_20GCF_5F000789215.1_202014-12-03]
7,166 sequences; 414,984,608 total letters
Query= NC_021246.1
Length=281182
Score E
Sequences producing significant alignments: (Bits) Value
seq3141 199 7e-46
seq7104 129 1e-24
seq7156 127 4e-24
>seq3141
Length=2848
Score = 199 bits (220), Expect = 7e-46
Identities = 181/228 (79%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 193134 CCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGAT 193193
|||||||| | |||||||| | ||||||||||| |||||| |||||||||||| |
Sbjct 1570 CCACCTCTAAGACGAAGTACTAAATGCAATGTAGACTCTTTCTGAATATTATAGTCAGCC 1511
Query 193194 AACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGT 193253
|| || | | ||| || ||||| |||||||| ||||||| | |||||||||||| ||
Sbjct 1510 AATGTGCGACCATCTTCCAATTGCTTTCCGGCGAAAATTAGACGCTGTTGATCAGGCGGA 1451
Query 193254 ATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACT 193313
|||||||| |||||||| ||||||| || | || | ||||||||| |||| ||||||
Sbjct 1450 ATTCCTTCCTTATCTTGAATTTTGGACTTAACATGTTCAATAGTATCCGAAGGCTCAACC 1391
Query 193314 TCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361
|| ||||| || || ||||| || || |||||||| || |||||||||
Sbjct 1390 TCAAGAGTGATGGTCTTACCCGTAAGGGTTTTTACGAAAATTTGCATT 1343
>seq7104
Length=1453772
Score = 129 bits (142), Expect = 1e-24
Identities = 170/236 (72%), Gaps = 0/236 (0%)
Strand=Plus/Minus
Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184
|||| |||||||| | || || || || | ||| | || | || || |||||||
Sbjct 422400 ATTTGCATACCACCACGTAAGCGTAGAACTAAATGTAGAGTGGATTCCTTCTGAATATTA 422341
Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244
|||||||| | || | ||| || || ||||| || || ||||| || | ||||||
Sbjct 422340 TAGTCGGACAGTGTGCGTCCATCCTCCAACTGTTTGCCAGCGAAAATCAAACGTTGTTGA 422281
Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304
|| || || |||||||| |||||||| ||||| | ||| | ||| ||| |||||||||
Sbjct 422280 TCTGGGGGGATTCCTTCCTTATCTTGAATTTTAGCTTTGACATTCTCAATTGTATCGGAA 422221
Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
| |||||| || | ||| || ||||| || || | ||||| || || || |||||
Sbjct 422220 GGCTCAACCTCCAAAGTGATGGTTTTTCCCGTCAAAGTTTTGACGAAAATCTGCAT 422165
Score = 127 bits (140), Expect = 4e-24
Identities = 159/218 (73%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 193146 CGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAA 193205
||||| |||| ||| | ||||| ||| || || || || ||||| | || |
Sbjct 422151 CGAAGAACCAAATGAAGTGTAGACTCCTTCTGGATGTTGTAATCGGACAGAGTGCGTCCG 422092
Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265
|| || | |||||| |||||||| ||||| | |||||||| || || |||||||||||
Sbjct 422091 TCTTCCAGTTGTTTACCGGCAAAGATTAAACGTTGTTGATCTGGGGGGATTCCTTCTTTG 422032
Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325
||||| || || | ||| | |||| |||||||||||| | ||||| || ||||| ||
Sbjct 422031 TCTTGAATCTTAGCTTTAACATTTTCAATAGTATCGGATGGTTCAACCTCCAGAGTGATG 421972
Query 193326 GTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363
|| || || || | || || || || |||||||||||
Sbjct 421971 GTCTTGCCAGTCAAGGTCTTCACGAAGATTTGCATTTT 421934
>seq7156
Length=3407544
Score = 127 bits (140), Expect = 4e-24
Identities = 168/233 (72%), Gaps = 0/233 (0%)
Strand=Plus/Plus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
|||||||| | | || || |||| ||| | || | ||| || || || ||||||
Sbjct 1526505 ATACCACCACGAAGACGCAGAACCAAATGGAGGGTTGACTCCTTTTGGATGTTGTAGTCG 1526564
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
|| || || | | ||| || |||||||||||||| || || || | ||||||||| ||
Sbjct 1526565 GACAAGGTGCGACCATCTTCCAATTGTTTTCCGGCGAAGATCAAACGCTGTTGATCTGGG 1526624
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| || || ||||| ||||| ||||| | ||| | |||| || || || |||| |||
Sbjct 1526625 GGGATACCCTCTTTGTCTTGGATTTTAGCTTTGACATTTTCGATGGTGTCAGAAGGCTCG 1526684
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363
|| |||| || || || ||||| |||| ||||| || || || ||||||||
Sbjct 1526685 ACCTCTAAGGTGATGGTCTTACCAGTTAAGGTTTTGACGAAAATCTGCATTTT 1526737
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 899573813457120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |