Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20dorsalis_20[refseq_20GCF_5F000789215.1_202014-12-03] 7,166 sequences; 414,984,608 total letters Query= NC_021806.1 Length=100418 Score E Sequences producing significant alignments: (Bits) Value seq6994 98.7 6e-16 >seq6994 Length=719417 Score = 98.7 bits (108), Expect = 6e-16 Identities = 130/178 (73%), Gaps = 2/178 (1%) Strand=Plus/Plus Query 96132 TTTAAAGCCTTCTTCTAG-AATTTTCTGAGCTAATACTGTAGCTGTGGTTGTTCCATCTC 96190 || ||| ||||||| ||| |||| | | ||||||||||||||||||||||| ||||| | Sbjct 330366 TTCAAAACCTTCTT-TAGCAATTGCCCGCGCTAATACTGTAGCTGTGGTTGTACCATCAC 330424 Query 96191 CTACTTCTGTATTAGTATTCTCAGCTACTTGTTTAATCATTTGAGCACCTAAGTTTTCAA 96250 | |||| ||| ||||| | ||| || | || || || || ||||| | |||| | Sbjct 330425 CAGCTTCCTCATTTGTATTATTAGCAACATCTTGAACCAGTTTTGCACCAATATTTTGGA 330484 Query 96251 ATGGATCTTCTAAATGAATTTCTCTAGCCACACTTACACCATCTTTAGTAATGATTGG 96308 || ||| | ||| | ||| | |||| ||| |||||||||| || || || |||| Sbjct 330485 ATTTATCCTTTAACTCAATAGATTTAGCAACAGTTACACCATCCTTGGTTATTTTTGG 330542 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 321184746679354