Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20dorsalis_20[refseq_20GCF_5F000789215.1_202014-12-03] 7,166 sequences; 414,984,608 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq7084 214 2e-50 seq7104 131 2e-25 seq7156 122 8e-23 >seq7084 Length=1258986 Score = 214 bits (236), Expect = 2e-50 Identities = 456/681 (67%), Gaps = 0/681 (0%) Strand=Plus/Plus Query 138153 TTTATCTACAGTAAACTTTATGGCATCAGCGGCTGGTTTCGTTCTCAGATAATACATTCC 138212 |||||| |||||||| | ||| |||| || ||||||||||| | || ||||||||| || Sbjct 1540 TTTATCCACAGTAAATTGTATAGCATTTGCAGCTGGTTTCGTACGCAAATAATACATGCC 1599 Query 138213 CGTTTTTAACCCATTTTCCCAGGCGTACATGTGTATCGAAGTGAGTAACGCGTAAGTCGG 138272 ||| || | || | |||| |||| | ||||| ||||| || | || | || Sbjct 1600 CGTCTTGAGACCTGCCTTCCAGCCGTAGAAATGTATAGAAGTAAGCTTGCCATAGTTGGG 1659 Query 138273 TTTCGCCAGAAATATGTTAAACGATTGACTCTGATCGATGAAAGCGCCTCGATCAATGGC 138332 | |||| |||||| ||||| ||||||||||||||||| || || ||||| || Sbjct 1660 CTCAGCCACGTGTATGTTGAACGACTGACTCTGATCGATGAATGCACCGCGATCTGCAGC 1719 Query 138333 CATGTTAATTAAATTTTTACTTTTCATCTCCCACACGGTCTTGTATAGATCACGAATATG 138392 ||| ||||| | |||| |||||||| || || ||||||||||| || || || Sbjct 1720 CATTTTAATCGAGGTTTTCACGGAAATCTCCCAAACAGTTTTGTATAGATCGCGTATGTG 1779 Query 138393 TCGCGGTATTGTTGCAATATTTTGAATGCTCCCGTTGGCCGCAATGATGCGATTTCTCAT 138452 | ||||| | | |||||| ||| ||| ||| | || || |||| |||| Sbjct 1780 CTGTGGTATGGATTCAATATGTTGTATGGAGCCGCGACTGGTTATAATATTATTTTTCAT 1839 Query 138453 GTCATCGTTGTACAGATTCAACTTGATCAAGTCGTTTATCAGATATCTGTTTATGACCTG 138512 ||||| | ||| | ||||| | | | ||| || || | |||| || || Sbjct 1840 ATCATCATCCCACAAACCCAACTCGGTTAGATCGCGTAACAAGTGATGATTTACAACTTG 1899 Query 138513 AAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGGCTCAAACGATTC 138572 ||||||||| | | || ||||| ||||| || ||| | || ||||| || || Sbjct 1900 AAATTCACCCGAAAGCACACGACGTGTATAAATATTAGAAGTGTACGGTTCAAATGACTC 1959 Query 138573 GTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCACCAAAAGAGAATT 138632 ||||| |||| ||| ||||| || | || || |||||| ||| | || | ||| || Sbjct 1960 ATTGTTGCCCATAATTTGAGCAGTTGAAGCAGTTGGCATGGGCGCAAGCAGCAAAGAGTT 2019 Query 138633 CCGTAAACCGTGAAGCTTGATTCGTTCCTTGAGCGACGACCAGTCCCACAAATCGCTAGG 138692 || | ||| || |||| ||| ||||| | | ||| | ||| | ||| | || Sbjct 2020 GCGGATACCATGTTGCTTTATTTTCTCCTTCAATTCGGTCCAATTCCAAAGATCAGTTGG 2079 Query 138693 TTTTTTGTTCCACATATCGTACTGTAACATTCCCAAACTTGCGGGACTGCCTTCGTACGA 138752 | |||| | |||||| || |||||||| || ||| ||| |||| |||| |||| Sbjct 2080 TGTTTTATCCCACATGTCATACTGTAAAATACCCTTACTAACGGGTGAACCTTTATACGT 2139 Query 138753 ATCGTATACACCAAACTCTTGCGCCAACTCGTTGCTCGCCTCGAGCGCACCATAGTAAAT 138812 || || ||| | | || || || ||| || || || | || ||||||||||| Sbjct 2140 TTCATAGGTGCCATATTTTTCAGCTAATTCGCAACTGGCTTCCAATGCGCCATAGTAAAT 2199 Query 138813 AGTTTCGGCAATCTGCTGATT 138833 ||||||| || |||||||| Sbjct 2200 AGTTTCGAATATTTGCTGATT 2220 Score = 194 bits (214), Expect = 2e-44 Identities = 534/813 (66%), Gaps = 23/813 (3%) Strand=Plus/Plus Query 139123 TATTCGACAATTTCGGCACACAAATTACTACACTTGATCGTACCTAAATTTTGTTGATTG 139182 ||||| |||||||||| ||| |||||||||||||| || || || | ||| |||||||| Sbjct 2265 TATTCCACAATTTCGGTACATAAATTACTACACTTAATTGTGCCAACATTCTGTTGATTA 2324 Query 139183 CTTTTTCGGTTACAAGCATCTTTGTAAAGCATATACGGTGTGCCAGTTTCCACTTGTGTC 139242 || ||||| |||||||||||||| || | ||| || |||||||| || |||||||| | Sbjct 2325 CTCTTTCGATTACAAGCATCTTTATACAACATGTATGGTGTGCCGGTCTCCACTTGCGAT 2384 Query 139243 TCTATAATGAATTTGAAC--AAGTCCCT-AGCTTGTATTTGACGCACGTAAAGTTCGTCG 139299 || |||||| | ||| ||| | | |||| ||||| | | || | || Sbjct 2385 TCAATAATG---CTAAACCAAAGACTTTGTGCTTTTATTTTCTTATTGGCACGTCCTTCC 2441 Query 139300 CGCTCGTACTTTTCGTAGAGTTCGTCGAATCGTTCACCGTAGGCGTCAGAAAGATCGCGA 139359 | || || || || | | ||||| |||||| | | ||| | | || || Sbjct 2442 TGTTCATATTTCAGATATAACTTTTCGAACTCTTCACCCCATACTTCATGTAAACCGGGA 2501 Query 139360 CACTTGTCAGGACACATGAGCGACCATACGCCGTTCGCCTTGACGCGCCTCATGAACAGA 139419 ||||||| |||||||| |||||||| | | | || | || || |||| || ||| Sbjct 2502 CACTTGTGTGGACACATTAGCGACCAGTCTTCATCGGCTTCTACACGTTTCATAAATAGA 2561 Query 139420 TCCGGAATCCACAAAGCGAACAGCAAATCGCGCGCCTTCTTATCTTCCGAACCCATGTTA 139479 || || |||||||| || | | |||||| | || | ||||| ||| |||| Sbjct 2562 TCAGGTATCCACAAGGCATAGAACAAATCTCTGGCACGATGCTCTTCTTTACCAGTGTTT 2621 Query 139480 CGTTTCATGTTAAGGAAATCAAAAACGTCAGCGTGCCATGGTTCCAGATAGATGGCCATT 139539 |||| | | || || |||| ||||| ||||||||||| || |||||||| | Sbjct 2622 TTCTTCAAATCCAAAAATTCGAAAATATCAGCATGCCATGGTTCGAGGTAGATGGCAAAG 2681 Query 139540 GCGCCTTTCCGTTT---GCCACCTTGATCGACGTGTCGTACAGCATTATTGAATACGCGC 139596 ||||| |||||| || |||||||| || | ||| | ||||||||| || ||| Sbjct 2682 GCGCCGGGCCGTTTACCGCACCCTTGATCCACATAGCGTGCTATATTATTGAACACTCGC 2741 Query 139597 AACATCGGCTCCAGACCGCTCGCTGTTCCGTTGGT----GCTACGGATGGGACTGTTGCG 139652 ||||| ||| ||| ||| | | | | | || || || | | | | || ||||| Sbjct 2742 AACATAGGCACCAAACCATTTGATTTGCTATTTGTACCCGCAATTGCAGTGCCTTTTGCG 2801 Query 139653 AGCTCGGACGTCATGTACATTGATGCCGATTCCGCCGCCAAATTTGGATATTAAAACGCA 139712 || | | |||||| || | || || ||||| || ||||||| || || | || Sbjct 2802 ----CGTATGCAATGTACGTTCAGACCAATACCGCCAGCAGATTTGGAAATCAATGCACA 2857 Query 139713 ATCGCGT---AATGTCTCGTATATACCTCTTATGCTGTCGTCCTGCATCGTGACCAGAAA 139769 | || |||| | | ||||| ||| |||||| ||| || | ||||| Sbjct 2858 TTGATGTGCAGATGT---GAAAATACCATCAATGGAATCGTCCACCATGGTCAGTAGAAA 2914 Query 139770 GCATGACGAAAGTTGCGGTAGTTTCGTGCCGGCTGCAAACAGAGTAGGACTCGCGTGCGT 139829 |||||| || | |||||| | || ||| | || || || || || ||| || || || Sbjct 2915 GCATGATGACAATTGCGGCTGCTTAGTGGCAGCAGCGAAAAGCGTTGGAGAAGCATGTGT 2974 Query 139830 GAACATTTGTTTCGACATCAATTCGTACGTTTCGATGGCGCTCACAATATCCCTTCCGTG 139889 || ||| || | ||| | ||| |||||||| || | || || || || Sbjct 2975 AAAATAACGTTCGGAAAGCAAGTTGTAAGTTTCGATTGCTGCATCGATGTCTTCGCCATG 3034 Query 139890 GATACCGACAGAGACTCGCATCAGCATATGTTG 139922 ||||||| | || ||||| | |||||| || Sbjct 3035 TATACCGATGGCAACACGCATTAACATATGCTG 3067 >seq7104 Length=1453772 Score = 131 bits (144), Expect = 2e-25 Identities = 158/212 (75%), Gaps = 6/212 (3%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| ||||| | || || | || || || || || || || || || ||| | || Sbjct 421937 ATGCAAATCTTCGTGAAGACCTTGACTGGCAAGACCATCACTCTGGAGGTTGAACCATCC 421996 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | |||| || ||| ||||| ||||||||||||||||| || || |||||| Sbjct 421997 GATACTATTGAAAATGTTAAAGCTAAGATTCAAGACAAAGAAGGAATCCCCCCAGATCAA 422056 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACA---TGTCAGATTAT 24880 |||||||| ||||||||||| ||||| ||||| || || || || |||| ||||| Sbjct 422057 CAACGTTTAATCTTTGCCGGTAAACAACTGGAAGA--CG-GACGCACTCTGTCCGATTAC 422113 Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGT 24912 ||||| || ||||| || ||||| || ||||| Sbjct 422114 AACATCCAGAAGGAGTCTACACTTCATTTGGT 422145 Score = 120 bits (132), Expect = 3e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | ||||| | || || ||||| || || | || || || | || Sbjct 422165 ATGCAGATTTTCGTCAAAACTTTGACGGGAAAAACCATCACTTTGGAGGTTGAGCCTTCC 422224 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || ||| | || | || ||| || || ||||| || |||||||| || || |||||| Sbjct 422225 GATACAATTGAGAATGTCAAAGCTAAAATTCAAGATAAGGAAGGAATCCCCCCAGATCAA 422284 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACA-TGTCAGATTATAA 24882 ||||||||||| || || || |||||| ||||||| | || ||| |||| || ||||| Sbjct 422285 CAACGTTTGATTTTCGCTGGCAAACAGTTGGAGGA-TGGACGCACACTGTCCGACTATAA 422343 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||||| |||||||| || ||||| || || | || || || || || Sbjct 422344 TATTCAGAAGGAATCCACTCTACATTTAGTTCTACGCTTACGTGGTGG 422391 >seq7156 Length=3407544 Score = 122 bits (134), Expect = 8e-23 Identities = 156/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | ||||| |||| ||||| || || || | || || || | | Sbjct 1526734 ATGCAGATTTTCGTCAAAACCTTAACTGGTAAGACCATCACCTTAGAGGTCGAGCCTTCT 1526675 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | |||| || ||| || |||||||||||||| || || || || |||||| Sbjct 1526674 GACACCATCGAAAATGTCAAAGCTAAAATCCAAGACAAAGAGGGTATCCCCCCAGATCAA 1526615 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||||||||||| ||||| ||||| |||| ||| | | | |||| || || ||| Sbjct 1526614 CAGCGTTTGATCTTCGCCGGAAAACAATTGGAAGATGGTCGCACCTTGTCCGACTACAAC 1526555 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 || |||||||| || || || || ||||| |||| Sbjct 1526554 ATCCAAAAGGAGTCAACCCTCCATTTGGTTCTGCG 1526520 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449857300422480