Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20dorsalis_20[refseq_20GCF_5F000789215.1_202014-12-03] 7,166 sequences; 414,984,608 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq7104 131 1e-25 >seq7104 Length=1453772 Score = 131 bits (144), Expect = 1e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34204 GGCGGGTTTTTCAGTATGAAGGTGTTGAGCTTATGCGAGAAGTGTAGCGTGCCGTGATAA 34263 ||||| || |||| ||||| ||||| | ||| || || | || || ||| || Sbjct 1087960 GGCGGATTCTTCAAGATGAACGTGTTAACCTTGTGATTGACTTTTAAGAGACCATGAAAA 1088019 Query 34264 CCGCATGCTTTGCAGCCCTGACAGATAATGTTCTTTTTAGCGGACACGATGAGCTCAGTC 34323 ||||| |||||||| | || | || | | || ||||| || ||| | | || ||| Sbjct 1088020 CCGCAAGCTTTGCATGCTTGCGAAATGGTTTGATTCTTAGCCGAGACGGTTAAATCGGTC 1088079 Query 34324 TCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGCAGGTCC 34383 ||||| ||||| |||||||| ||||| || || ||||| ||||||||||| ||||| ||| Sbjct 1088080 TCCGGATTGTCGCATTCCGGGCACAAGACGAATTTGCGTATGAAACCATCGAGCAGATCC 1088139 Query 34384 TGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTT 34430 || || || || ||||||||||| || ||||| || ||||| || Sbjct 1088140 TGCAATTTGCTGGCATCGTGGGAGCCATTTACGATAAAACGTTCATT 1088186 Score = 123 bits (136), Expect = 2e-23 Identities = 157/214 (73%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 34432 TTGTAATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATG 34491 ||||| || | || ||||| ||||||| ||||| || || ||||| |||||||| || Sbjct 1088268 TTGTAGTCAAATTGTGTTTGAGCGCCCAATTCGCAGCCAAAATACTTGGTCGGGTAGGTG 1088327 Query 34492 GCCGGACGTCCAA--GCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGC 34549 ||||||||||| | |||| | || | ||| | ||| || || || || || ||||||| Sbjct 1088328 GCCGGACGTCCGATGGCGCGT--GCCACTTCAGCCATATTAACAATAACGGTTTTGATGC 1088385 Query 34550 CGTTGCCCTTTCCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGT 34609 |||| || || || |||||||| || | ||| |||||||| || |||||||| || Sbjct 1088386 CGTTACCTTTGCCCTCGACCTTAGCTTGCAAGCGTGGCATTTTATAACGGTAGAAAATGT 1088445 Query 34610 CCGCCACATTGCGGTTAACGTTCACAGTCCCCAT 34643 | | ||||| || || || || || | ||||| Sbjct 1088446 CGGTGACATTACGATTCACATTAACGGAACCCAT 1088479 Score = 86.0 bits (94), Expect = 5e-12 Identities = 139/200 (70%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 110270 AAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCT 110329 ||||||||||| || || || || || || ||||| ||||| || | || || || Sbjct 421934 AAAATGCAAATCTTCGTGAAGACCTTGACTGGCAAGACCATCACTCTGGAGGTTGAACCA 421993 Query 110330 GACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGAT 110389 ||||||| | | | || ||| |||||| ||||||||||| | ||| ||| Sbjct 421994 TCCGATACTATTGAAAATGTTAAAGCTAAGATTCAAGACAAAGAAGGAATCCCCCCAGAT 422053 Query 110390 CAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTAC 110449 |||||| | | || | ||| |||||||| ||||| || | | || || | |||||| Sbjct 422054 CAACAACGTTTAATCTTTGCCGGTAAACAACTGGAAGACGGACGCACTCTGTCCGATTAC 422113 Query 110450 AACATTCAAAAAGAATCTAC 110469 ||||| || || || ||||| Sbjct 422114 AACATCCAGAAGGAGTCTAC 422133 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412805544220838