Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20dorsalis_20[refseq_20GCF_5F000789215.1_202014-12-03]
7,166 sequences; 414,984,608 total letters
Query= NC_021924.1
Length=129052
Score E
Sequences producing significant alignments: (Bits) Value
seq7104 131 1e-25
>seq7104
Length=1453772
Score = 131 bits (144), Expect = 1e-25
Identities = 165/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 34204 GGCGGGTTTTTCAGTATGAAGGTGTTGAGCTTATGCGAGAAGTGTAGCGTGCCGTGATAA 34263
||||| || |||| ||||| ||||| | ||| || || | || || ||| ||
Sbjct 1087960 GGCGGATTCTTCAAGATGAACGTGTTAACCTTGTGATTGACTTTTAAGAGACCATGAAAA 1088019
Query 34264 CCGCATGCTTTGCAGCCCTGACAGATAATGTTCTTTTTAGCGGACACGATGAGCTCAGTC 34323
||||| |||||||| | || | || | | || ||||| || ||| | | || |||
Sbjct 1088020 CCGCAAGCTTTGCATGCTTGCGAAATGGTTTGATTCTTAGCCGAGACGGTTAAATCGGTC 1088079
Query 34324 TCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGCAGGTCC 34383
||||| ||||| |||||||| ||||| || || ||||| ||||||||||| ||||| |||
Sbjct 1088080 TCCGGATTGTCGCATTCCGGGCACAAGACGAATTTGCGTATGAAACCATCGAGCAGATCC 1088139
Query 34384 TGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTT 34430
|| || || || ||||||||||| || ||||| || ||||| ||
Sbjct 1088140 TGCAATTTGCTGGCATCGTGGGAGCCATTTACGATAAAACGTTCATT 1088186
Score = 123 bits (136), Expect = 2e-23
Identities = 157/214 (73%), Gaps = 4/214 (2%)
Strand=Plus/Plus
Query 34432 TTGTAATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATG 34491
||||| || | || ||||| ||||||| ||||| || || ||||| |||||||| ||
Sbjct 1088268 TTGTAGTCAAATTGTGTTTGAGCGCCCAATTCGCAGCCAAAATACTTGGTCGGGTAGGTG 1088327
Query 34492 GCCGGACGTCCAA--GCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGC 34549
||||||||||| | |||| | || | ||| | ||| || || || || || |||||||
Sbjct 1088328 GCCGGACGTCCGATGGCGCGT--GCCACTTCAGCCATATTAACAATAACGGTTTTGATGC 1088385
Query 34550 CGTTGCCCTTTCCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGT 34609
|||| || || || |||||||| || | ||| |||||||| || |||||||| ||
Sbjct 1088386 CGTTACCTTTGCCCTCGACCTTAGCTTGCAAGCGTGGCATTTTATAACGGTAGAAAATGT 1088445
Query 34610 CCGCCACATTGCGGTTAACGTTCACAGTCCCCAT 34643
| | ||||| || || || || || | |||||
Sbjct 1088446 CGGTGACATTACGATTCACATTAACGGAACCCAT 1088479
Score = 86.0 bits (94), Expect = 5e-12
Identities = 139/200 (70%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 110270 AAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCT 110329
||||||||||| || || || || || || ||||| ||||| || | || || ||
Sbjct 421934 AAAATGCAAATCTTCGTGAAGACCTTGACTGGCAAGACCATCACTCTGGAGGTTGAACCA 421993
Query 110330 GACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGAT 110389
||||||| | | | || ||| |||||| ||||||||||| | ||| |||
Sbjct 421994 TCCGATACTATTGAAAATGTTAAAGCTAAGATTCAAGACAAAGAAGGAATCCCCCCAGAT 422053
Query 110390 CAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTAC 110449
|||||| | | || | ||| |||||||| ||||| || | | || || | ||||||
Sbjct 422054 CAACAACGTTTAATCTTTGCCGGTAAACAACTGGAAGACGGACGCACTCTGTCCGATTAC 422113
Query 110450 AACATTCAAAAAGAATCTAC 110469
||||| || || || |||||
Sbjct 422114 AACATCCAGAAGGAGTCTAC 422133
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 412805544220838
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |