Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20dorsalis_20[refseq_20GCF_5F000789215.1_202014-12-03]
7,166 sequences; 414,984,608 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq7156 109 4e-19
seq3141 89.7 3e-13
seq7104 84.2 1e-11
>seq7156
Length=3407544
Score = 109 bits (120), Expect = 4e-19
Identities = 152/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824
||| |||| || | ||| |||||| || ||||| ||||| || | | |||| ||||
Sbjct 1526522 CAGAACCAAATGGAGGGTTGACTCCTTTTGGATGTTGTAGTCGGACAAGGTGCGACCATC 1526581
Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
|||| ||| |||||||||||||||| || || || ||| | || | ||||| |||||
Sbjct 1526582 TTCCAATTGTTTTCCGGCGAAGATCAAACGCTGTTGATCTGGGGGGATACCCTCTTTGTC 1526641
Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944
| ||||| |||||| | | || | ||| | |||||| || | ||| |||||
Sbjct 1526642 TTGGATTTTAGCTTTGACATTTTCGATGGTGTCAGAAGGCTCGACCTCTAAGGTGATGGT 1526701
Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
||| || || | ||| || || || ||||||||
Sbjct 1526702 CTTACCAGTTAAGGTTTTGACGAAAATCTGCAT 1526734
>seq3141
Length=2848
Score = 89.7 bits (98), Expect = 3e-13
Identities = 135/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845
||| |||||||| |||||||| | | |||| |||| |||| |||||||||||||||
Sbjct 1535 CTCTTTCTGAATATTATAGTCAGCCAATGTGCGACCATCTTCCAATTGCTTTCCGGCGAA 1476
Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905
|| || || || || || |||| | || ||||| || | ||||| || ||
Sbjct 1475 AATTAGACGCTGTTGATCAGGCGGAATTCCTTCCTTATCTTGAATTTTGGACTTAACATG 1416
Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965
| | || | || | ||| || |||| || |||||||| ||||| ||||| |||||
Sbjct 1415 TTCAATAGTATCCGAAGGCTCAACCTCAAGAGTGATGGTCTTACCCGTAAGGGTTTTTAC 1356
Query 34966 AAAGATCTGCAT 34977
|| || |||||
Sbjct 1355 GAAAATTTGCAT 1344
>seq7104
Length=1453772
Score = 84.2 bits (92), Expect = 1e-11
Identities = 136/194 (70%), Gaps = 4/194 (2%)
Strand=Plus/Minus
Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846
||||||||||| |||||||| || || |||| |||| |||| || || || |||||
Sbjct 422355 TCCTTCTGAATATTATAGTCGGACAGTGTGCGTCCATCCTCCAACTGTTTGCCAGCGAAA 422296
Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906
|||| ||||| || ||| | || | || ||||| || | ||||| |||||| ||
Sbjct 422295 ATCAAACGTTGTTGATCTGGGGGGATTCCTTCCTTATCTTGAATTTTAGCTTTGAC--AT 422238
Query 34907 GCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTA 34964
|| || | || | ||| || || | || ||||| |||||||| | || || |
Sbjct 422237 TCTCAATTGTATCGGAAGGCTCAACCTCCAAAGTGATGGTTTTTCCCGTCAAAGTTTTGA 422178
Query 34965 CAAAGATCTGCATG 34978
| || |||||||||
Sbjct 422177 CGAAAATCTGCATG 422164
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325664355415754
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |