Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20dorsalis_20[refseq_20GCF_5F000789215.1_202014-12-03]
7,166 sequences; 414,984,608 total letters
Query= NC_024450.1
Length=204054
Score E
Sequences producing significant alignments: (Bits) Value
seq7134 95.1 2e-14
seq6874 95.1 2e-14
seq7106 93.3 6e-14
seq7141 89.7 7e-13
seq6975 89.7 7e-13
>seq7134
Length=2137532
Score = 95.1 bits (104), Expect = 2e-14
Identities = 66/75 (88%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 8655 TATTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGA 8714
|| |||||| |||||||||||||||||| |||| ||||| | |||||||||||||||| |
Sbjct 57165 TAATCCTCGATAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAA 57106
Query 8715 TTCCCCGACGAGGAG 8729
||||||| || ||||
Sbjct 57105 TTCCCCGTCGGGGAG 57091
Score = 95.1 bits (104), Expect = 2e-14
Identities = 66/74 (89%), Gaps = 1/74 (1%)
Strand=Plus/Plus
Query 11729 GTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 11787
||||||| |||||||||||| ||||| |||| ||||| | ||||||||||||||||||||
Sbjct 104741 GTCCTCGGTAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATT 104800
Query 11788 CCCCGACGAGGAGG 11801
||||| || |||||
Sbjct 104801 CCCCGCCGGGGAGG 104814
Score = 95.1 bits (104), Expect = 2e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 104742 TCCTCGGTAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 104801
Query 8718 CCCGACGAGGAG 8729
|||| || ||||
Sbjct 104802 CCCGCCGGGGAG 104813
Score = 91.5 bits (100), Expect = 2e-13
Identities = 65/75 (87%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 139352 ACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACT 139411
||||| || |||||| | |||||||||||||||| | |||| |||||||| ||||||||
Sbjct 57090 ACTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACT 57149
Query 139412 ATACTAACGAGGATT 139426
|||||| ||||||||
Sbjct 57150 ATACTATCGAGGATT 57164
Score = 91.5 bits (100), Expect = 2e-13
Identities = 66/75 (88%), Gaps = 1/75 (1%)
Strand=Plus/Minus
Query 11727 CAGTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGA 11785
||||||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| |
Sbjct 1169656 CAGTCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAA 1169597
Query 11786 TTCCCCGACGAGGAG 11800
||||||| || ||||
Sbjct 1169596 TTCCCCGTCGGGGAG 1169582
Score = 89.7 bits (98), Expect = 7e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| ||||
Sbjct 108708 TCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 108649
Query 8718 CCCGACGAGGAG 8729
|||| || ||||
Sbjct 108648 CCCGTCGGGGAG 108637
Score = 89.7 bits (98), Expect = 7e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| ||||
Sbjct 1169653 TCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 1169594
Query 8718 CCCGACGAGGAG 8729
|||| || ||||
Sbjct 1169593 CCCGTCGGGGAG 1169582
Score = 89.7 bits (98), Expect = 7e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| ||||
Sbjct 1799621 TCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 1799562
Query 8718 CCCGACGAGGAG 8729
|||| || ||||
Sbjct 1799561 CCCGTCGGGGAG 1799550
Score = 87.8 bits (96), Expect = 2e-12
Identities = 64/73 (88%), Gaps = 1/73 (1%)
Strand=Plus/Minus
Query 11729 GTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 11787
||||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| |||
Sbjct 108709 GTCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATT 108650
Query 11788 CCCCGACGAGGAG 11800
||||| || ||||
Sbjct 108649 CCCCGTCGGGGAG 108637
Score = 86.0 bits (94), Expect = 8e-12
Identities = 63/72 (88%), Gaps = 1/72 (1%)
Strand=Plus/Minus
Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| ||||
Sbjct 57162 TCCTCGATAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 57103
Query 11789 CCCGACGAGGAG 11800
|||| || ||||
Sbjct 57102 CCCGTCGGGGAG 57091
Score = 86.0 bits (94), Expect = 8e-12
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| || |||||| |||||||||||||||||| | |||| |||||||| | |||||||
Sbjct 104813 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 104754
Query 139413 TACTAACGAGGA 139424
||||| ||||||
Sbjct 104753 TACTACCGAGGA 104742
Score = 86.0 bits (94), Expect = 8e-12
Identities = 63/72 (88%), Gaps = 1/72 (1%)
Strand=Plus/Minus
Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| ||||
Sbjct 1799621 TCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 1799562
Query 11789 CCCGACGAGGAG 11800
|||| || ||||
Sbjct 1799561 CCCGTCGGGGAG 1799550
Score = 84.2 bits (92), Expect = 3e-11
Identities = 63/74 (85%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 139352 ACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACT 139411
||||| || |||||| | |||||||||||||||| | |||| |||||||| | ||||||
Sbjct 1799549 ACTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACT 1799608
Query 139412 ATACTAACGAGGAT 139425
|||||| |||||||
Sbjct 1799609 ATACTATCGAGGAT 1799622
Score = 82.4 bits (90), Expect = 1e-10
Identities = 62/73 (85%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 139352 ACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACT 139411
||||| || |||||| | |||||||||||||||| | |||| |||||||| | ||||||
Sbjct 1169581 ACTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACT 1169640
Query 139412 ATACTAACGAGGA 139424
|||||| ||||||
Sbjct 1169641 ATACTATCGAGGA 1169653
>seq6874
Length=275246
Score = 95.1 bits (104), Expect = 2e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 256524 TCCTCGGTAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 256465
Query 8718 CCCGACGAGGAG 8729
|||| || ||||
Sbjct 256464 CCCGCCGGGGAG 256453
Score = 93.3 bits (102), Expect = 6e-14
Identities = 65/73 (89%), Gaps = 1/73 (1%)
Strand=Plus/Minus
Query 11729 GTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 11787
||||||| |||||||||||| ||||| |||| ||||| | ||||||||||||||||||||
Sbjct 256525 GTCCTCGGTAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATT 256466
Query 11788 CCCCGACGAGGAG 11800
||||| || ||||
Sbjct 256465 CCCCGCCGGGGAG 256453
Score = 86.0 bits (94), Expect = 8e-12
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| || |||||| |||||||||||||||||| | |||| |||||||| | |||||||
Sbjct 256453 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 256512
Query 139413 TACTAACGAGGA 139424
||||| ||||||
Sbjct 256513 TACTACCGAGGA 256524
>seq7106
Length=1862430
Score = 93.3 bits (102), Expect = 6e-14
Identities = 68/78 (87%), Gaps = 1/78 (1%)
Strand=Plus/Minus
Query 11724 ACCCAGTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTT 11782
|| ||||||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||
Sbjct 1726552 ACGCAGTCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTT 1726493
Query 11783 CGATTCCCCGACGAGGAG 11800
| |||||||| || ||||
Sbjct 1726492 CAATTCCCCGTCGGGGAG 1726475
Score = 89.7 bits (98), Expect = 7e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| ||||
Sbjct 1615290 TCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 1615349
Query 8718 CCCGACGAGGAG 8729
|||| || ||||
Sbjct 1615350 CCCGTCGGGGAG 1615361
Score = 89.7 bits (98), Expect = 7e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| ||||
Sbjct 1617351 TCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 1617410
Query 8718 CCCGACGAGGAG 8729
|||| || ||||
Sbjct 1617411 CCCGTCGGGGAG 1617422
Score = 89.7 bits (98), Expect = 7e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| ||||
Sbjct 1726546 TCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 1726487
Query 8718 CCCGACGAGGAG 8729
|||| || ||||
Sbjct 1726486 CCCGTCGGGGAG 1726475
Score = 87.8 bits (96), Expect = 2e-12
Identities = 66/78 (85%), Gaps = 0/78 (0%)
Strand=Plus/Minus
Query 139348 CACAACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAAC 139407
|||| |||| || |||||| | |||||||||||||||| | |||| |||||||| | ||
Sbjct 1615366 CACATCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGAC 1615307
Query 139408 CACTATACTAACGAGGAT 139425
|||||||||| |||||||
Sbjct 1615306 CACTATACTATCGAGGAT 1615289
Score = 86.0 bits (94), Expect = 8e-12
Identities = 63/72 (88%), Gaps = 1/72 (1%)
Strand=Plus/Plus
Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| ||||
Sbjct 1615290 TCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 1615349
Query 11789 CCCGACGAGGAG 11800
|||| || ||||
Sbjct 1615350 CCCGTCGGGGAG 1615361
Score = 86.0 bits (94), Expect = 8e-12
Identities = 65/77 (84%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| || |||||| | |||||||||||||||| | |||| |||||||| | |||||||
Sbjct 1617422 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 1617363
Query 139413 TACTAACGAGGATTTTG 139429
||||| ||||||| |||
Sbjct 1617362 TACTATCGAGGATGTTG 1617346
Score = 86.0 bits (94), Expect = 8e-12
Identities = 63/72 (88%), Gaps = 1/72 (1%)
Strand=Plus/Plus
Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| ||||
Sbjct 1617351 TCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 1617410
Query 11789 CCCGACGAGGAG 11800
|||| || ||||
Sbjct 1617411 CCCGTCGGGGAG 1617422
>seq7141
Length=2858276
Score = 89.7 bits (98), Expect = 7e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| ||||
Sbjct 1723112 TCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 1723053
Query 8718 CCCGACGAGGAG 8729
|||| || ||||
Sbjct 1723052 CCCGTCGGGGAG 1723041
Score = 86.0 bits (94), Expect = 8e-12
Identities = 65/77 (84%), Gaps = 0/77 (0%)
Strand=Plus/Plus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| || |||||| | |||||||||||||||| | |||| |||||||| | |||||||
Sbjct 1723041 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 1723100
Query 139413 TACTAACGAGGATTTTG 139429
||||| ||||||| |||
Sbjct 1723101 TACTATCGAGGATGTTG 1723117
Score = 86.0 bits (94), Expect = 8e-12
Identities = 63/72 (88%), Gaps = 1/72 (1%)
Strand=Plus/Minus
Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| ||||
Sbjct 1723112 TCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 1723053
Query 11789 CCCGACGAGGAG 11800
|||| || ||||
Sbjct 1723052 CCCGTCGGGGAG 1723041
>seq6975
Length=485666
Score = 89.7 bits (98), Expect = 7e-13
Identities = 67/79 (85%), Gaps = 0/79 (0%)
Strand=Plus/Minus
Query 139351 AACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCAC 139410
|||||| || |||||| | |||||||||||||||| | |||| |||||||| | |||||
Sbjct 350230 AACTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCAC 350171
Query 139411 TATACTAACGAGGATTTTG 139429
||||||| ||||||| |||
Sbjct 350170 TATACTATCGAGGATGTTG 350152
Score = 89.7 bits (98), Expect = 7e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| ||||
Sbjct 350157 TCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 350216
Query 8718 CCCGACGAGGAG 8729
|||| || ||||
Sbjct 350217 CCCGTCGGGGAG 350228
Score = 89.7 bits (98), Expect = 7e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| ||||
Sbjct 357536 TCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 357595
Query 8718 CCCGACGAGGAG 8729
|||| || ||||
Sbjct 357596 CCCGTCGGGGAG 357607
Score = 87.8 bits (96), Expect = 2e-12
Identities = 64/73 (88%), Gaps = 1/73 (1%)
Strand=Plus/Plus
Query 11729 GTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 11787
||||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| |||
Sbjct 357535 GTCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATT 357594
Query 11788 CCCCGACGAGGAG 11800
||||| || ||||
Sbjct 357595 CCCCGTCGGGGAG 357607
Score = 86.0 bits (94), Expect = 8e-12
Identities = 63/72 (88%), Gaps = 1/72 (1%)
Strand=Plus/Plus
Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| ||||
Sbjct 350157 TCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 350216
Query 11789 CCCGACGAGGAG 11800
|||| || ||||
Sbjct 350217 CCCGTCGGGGAG 350228
Score = 82.4 bits (90), Expect = 1e-10
Identities = 62/73 (85%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 139352 ACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACT 139411
||||| || |||||| | |||||||||||||||| | |||| |||||||| | ||||||
Sbjct 357608 ACTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACT 357549
Query 139412 ATACTAACGAGGA 139424
|||||| ||||||
Sbjct 357548 ATACTATCGAGGA 357536
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 652786321427040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |