Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20dorsalis_20[refseq_20GCF_5F000789215.1_202014-12-03] 7,166 sequences; 414,984,608 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq7104 120 3e-22 seq3141 102 8e-17 seq7156 82.4 7e-11 >seq7104 Length=1453772 Score = 120 bits (132), Expect = 3e-22 Identities = 155/209 (74%), Gaps = 4/209 (2%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 ||||||| ||||| || ||||| ||||| || ||| || ||| | | | ||||| | Sbjct 422370 AAATGTAGAGTGGATTCCTTCTGAATATTATAGTCGGACAGTGTGCGTCCA-TCCTCCAA 422312 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||| ||||| ||| |||| | || || || || || ||||| |||||||| || ||| Sbjct 422311 CTGTTTGCCAGCGAAAATCAAACGTTGTTGATCTGGGGGGATTCCTTCCTTATCT-TGAA 422253 Query 133574 CTTTTGCTT-GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632 ||| |||| || | ||||| || |||| ||||| || || | |||| |||||| | Sbjct 422252 TTTTAGCTTTGACATTCTCAATTGTATCGGAAGGCTCAACCTCCAAAGTGATGGTTTTTC 422193 Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCATG 133661 | |||| |||||| ||||||||||||||| Sbjct 422192 CCGTCAAAGTTTTGACGAAAATCTGCATG 422164 >seq3141 Length=2848 Score = 102 bits (112), Expect = 8e-17 Identities = 153/212 (72%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 ||||| | || ||||||||||| ||||| || || ||| ||| ||| | || || | Sbjct 1549 AAATGCAATGTAGACTCTTTCTGAATATTATAGTCAGCCAATGTGCGACCA-TCTTCCAA 1491 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||||| || ||| |||| || ||||| || || || || || |||||||| || ||| Sbjct 1490 TTGCTTTCCGGCGAAAATTAGACGCTGTTGATCAGGCGGAATTCCTTCCTTATCT-TGAA 1432 Query 133574 CTTTTG-CTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632 ||| | ||| | || |||| || || | ||||| || || | |||| ||| || | Sbjct 1431 TTTTGGACTTAACATGTTCAATAGTATCCGAAGGCTCAACCTCAAGAGTGATGGTCTTAC 1372 Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCATGGCT 133664 | || || |||||||||||||| ||||| ||| Sbjct 1371 CCGTAAGGGTTTTTACGAAAATTTGCATTGCT 1340 >seq7156 Length=3407544 Score = 82.4 bits (90), Expect = 7e-11 Identities = 146/208 (70%), Gaps = 4/208 (2%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 ||||| | ||| ||||| || || || ||||| ||| || ||| ||| | || || | Sbjct 1526529 AAATGGAGGGTTGACTCCTTTTGGATGTTGTAGTCGGACAAGGTGCGACCA-TCTTCCAA 1526587 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 || || || ||| | || | ||||| || || || ||||| || || ||||| ||| Sbjct 1526588 TTGTTTTCCGGCGAAGATCAAACGCTGTTGATCTGGGGGGATACCCTCTTTGTCTTGGAT 1526647 Query 133574 CTTTTGCTT-GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632 ||| |||| || | || | ||||| | ||||| || || | ||||| ||| || | Sbjct 1526648 -TTTAGCTTTGACATTTTCGATGGTGTCAGAAGGCTCGACCTCTAAGGTGATGGTCTTAC 1526706 Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCAT 133660 | || | ||||| |||||||||||||| Sbjct 1526707 CAGTTAAGGTTTTGACGAAAATCTGCAT 1526734 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483377497581840