Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20dorsalis_20[refseq_20GCF_5F000789215.1_202014-12-03]
7,166 sequences; 414,984,608 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq7104 120 3e-22
seq3141 102 8e-17
seq7156 82.4 7e-11
>seq7104
Length=1453772
Score = 120 bits (132), Expect = 3e-22
Identities = 155/209 (74%), Gaps = 4/209 (2%)
Strand=Plus/Minus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513
||||||| ||||| || ||||| ||||| || ||| || ||| | | | ||||| |
Sbjct 422370 AAATGTAGAGTGGATTCCTTCTGAATATTATAGTCGGACAGTGTGCGTCCA-TCCTCCAA 422312
Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573
||| ||||| ||| |||| | || || || || || ||||| |||||||| || |||
Sbjct 422311 CTGTTTGCCAGCGAAAATCAAACGTTGTTGATCTGGGGGGATTCCTTCCTTATCT-TGAA 422253
Query 133574 CTTTTGCTT-GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632
||| |||| || | ||||| || |||| ||||| || || | |||| |||||| |
Sbjct 422252 TTTTAGCTTTGACATTCTCAATTGTATCGGAAGGCTCAACCTCCAAAGTGATGGTTTTTC 422193
Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCATG 133661
| |||| |||||| |||||||||||||||
Sbjct 422192 CCGTCAAAGTTTTGACGAAAATCTGCATG 422164
>seq3141
Length=2848
Score = 102 bits (112), Expect = 8e-17
Identities = 153/212 (72%), Gaps = 4/212 (2%)
Strand=Plus/Minus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513
||||| | || ||||||||||| ||||| || || ||| ||| ||| | || || |
Sbjct 1549 AAATGCAATGTAGACTCTTTCTGAATATTATAGTCAGCCAATGTGCGACCA-TCTTCCAA 1491
Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573
||||| || ||| |||| || ||||| || || || || || |||||||| || |||
Sbjct 1490 TTGCTTTCCGGCGAAAATTAGACGCTGTTGATCAGGCGGAATTCCTTCCTTATCT-TGAA 1432
Query 133574 CTTTTG-CTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632
||| | ||| | || |||| || || | ||||| || || | |||| ||| || |
Sbjct 1431 TTTTGGACTTAACATGTTCAATAGTATCCGAAGGCTCAACCTCAAGAGTGATGGTCTTAC 1372
Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCATGGCT 133664
| || || |||||||||||||| ||||| |||
Sbjct 1371 CCGTAAGGGTTTTTACGAAAATTTGCATTGCT 1340
>seq7156
Length=3407544
Score = 82.4 bits (90), Expect = 7e-11
Identities = 146/208 (70%), Gaps = 4/208 (2%)
Strand=Plus/Plus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513
||||| | ||| ||||| || || || ||||| ||| || ||| ||| | || || |
Sbjct 1526529 AAATGGAGGGTTGACTCCTTTTGGATGTTGTAGTCGGACAAGGTGCGACCA-TCTTCCAA 1526587
Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573
|| || || ||| | || | ||||| || || || ||||| || || ||||| |||
Sbjct 1526588 TTGTTTTCCGGCGAAGATCAAACGCTGTTGATCTGGGGGGATACCCTCTTTGTCTTGGAT 1526647
Query 133574 CTTTTGCTT-GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632
||| |||| || | || | ||||| | ||||| || || | ||||| ||| || |
Sbjct 1526648 -TTTAGCTTTGACATTTTCGATGGTGTCAGAAGGCTCGACCTCTAAGGTGATGGTCTTAC 1526706
Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCAT 133660
| || | ||||| ||||||||||||||
Sbjct 1526707 CAGTTAAGGTTTTGACGAAAATCTGCAT 1526734
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483377497581840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |