Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20dorsalis_20[refseq_20GCF_5F000789215.1_202014-12-03] 7,166 sequences; 414,984,608 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq7156 131 1e-25 seq7104 125 5e-24 >seq7156 Length=3407544 Score = 131 bits (144), Expect = 1e-25 Identities = 168/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | ||| | |||||||| || || ||| ||||| |||||||| ||||| Sbjct 1526507 ACCACCACGAAGACGCAGAACCAAATGGAGGGTTGACTCCTTTTGGATGTTGTAGTCGGA 1526566 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 | ||||| | || ||||||||||||||||| || ||||||||||| |||||| | || Sbjct 1526567 CAAGGTGCGACCATCTTCCAATTGTTTTCCGGCGAAGATCAAACGCTGTTGATCTGGGGG 1526626 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||| |||||||| ||||| | || |||| || | |||||| | || | Sbjct 1526627 GATACCCTCTTTGTCTTGGATTTT-AGCTTTGACATTTTCGATGGTGTCAGAAGGCTCGA 1526685 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || | ||||| || ||||| ||||| ||||| || || |||||||| Sbjct 1526686 CCTCTAAGGTGATGGTCTTACCAGTTAAGGTTTTGACGAAAATCTGCAT 1526734 >seq7104 Length=1453772 Score = 125 bits (138), Expect = 5e-24 Identities = 174/240 (73%), Gaps = 4/240 (2%) Strand=Plus/Minus Query 33513 AAAATCGTCA--CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATG 33570 |||||| || ||||| | | ||| | |||||||| || || ||| || || ||| Sbjct 422175 AAAATCTGCATGCCACCACGTAGACGAAGAACCAAATGAAGTGTAGACTCCTTCTGGATG 422116 Query 33571 TTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGC 33630 ||||||||||| || |||||| |||| |||| |||||| |||||||| || ||||| || Sbjct 422115 TTGTAATCGGACAGAGTGCGTCCGTCTTCCAGTTGTTTACCGGCAAAGATTAAACGTTGT 422056 Query 33631 TGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTC 33689 |||||| | || | ||||||||||| ||| || | || ||||| || | || || Sbjct 422055 TGATCTGGGGGGATTCCTTCTTTGTCTTGAATCTT-AGCTTTAACATTTTCAATAGTATC 421997 Query 33690 GCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || ||| || || | ||||| || || || || || || || || ||||| ||||| Sbjct 421996 GGATGGTTCAACCTCCAGAGTGATGGTCTTGCCAGTCAAGGTCTTCACGAAGATTTGCAT 421937 Score = 113 bits (124), Expect = 3e-20 Identities = 164/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | || |||| || |||||||||||| || || || || || || ||||| Sbjct 422392 ACCACCACGTAAGCGTAGAACTAAATGTAGAGTGGATTCCTTCTGAATATTATAGTCGGA 422333 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 ||||||||| | || ||||| ||||| || || ||||||||||| || |||||| | || Sbjct 422332 CAGTGTGCGTCCATCCTCCAACTGTTTGCCAGCGAAAATCAAACGTTGTTGATCTGGGGG 422273 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||||| || || |||||| | || |||| || | || ||| | || | Sbjct 422272 GATTCCTTCCTTATCTTGAATTTT-AGCTTTGACATTCTCAATTGTATCGGAAGGCTCAA 422214 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || | ||||| ||||| || || || ||||| || || |||||||| Sbjct 422213 CCTCCAAAGTGATGGTTTTTCCCGTCAAAGTTTTGACGAAAATCTGCAT 422165 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328675292430720