Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20dorsalis_20[refseq_20GCF_5F000789215.1_202014-12-03]
7,166 sequences; 414,984,608 total letters
Query= NC_025257.1
Length=102759
Score E
Sequences producing significant alignments: (Bits) Value
seq7156 131 1e-25
seq7104 125 5e-24
>seq7156
Length=3407544
Score = 131 bits (144), Expect = 1e-25
Identities = 168/229 (73%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||| | | ||| | |||||||| || || ||| ||||| |||||||| |||||
Sbjct 1526507 ACCACCACGAAGACGCAGAACCAAATGGAGGGTTGACTCCTTTTGGATGTTGTAGTCGGA 1526566
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
| ||||| | || ||||||||||||||||| || ||||||||||| |||||| | ||
Sbjct 1526567 CAAGGTGCGACCATCTTCCAATTGTTTTCCGGCGAAGATCAAACGCTGTTGATCTGGGGG 1526626
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| ||| |||||||| ||||| | || |||| || | |||||| | || |
Sbjct 1526627 GATACCCTCTTTGTCTTGGATTTT-AGCTTTGACATTTTCGATGGTGTCAGAAGGCTCGA 1526685
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
| || | ||||| || ||||| ||||| ||||| || || ||||||||
Sbjct 1526686 CCTCTAAGGTGATGGTCTTACCAGTTAAGGTTTTGACGAAAATCTGCAT 1526734
>seq7104
Length=1453772
Score = 125 bits (138), Expect = 5e-24
Identities = 174/240 (73%), Gaps = 4/240 (2%)
Strand=Plus/Minus
Query 33513 AAAATCGTCA--CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATG 33570
|||||| || ||||| | | ||| | |||||||| || || ||| || || |||
Sbjct 422175 AAAATCTGCATGCCACCACGTAGACGAAGAACCAAATGAAGTGTAGACTCCTTCTGGATG 422116
Query 33571 TTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGC 33630
||||||||||| || |||||| |||| |||| |||||| |||||||| || ||||| ||
Sbjct 422115 TTGTAATCGGACAGAGTGCGTCCGTCTTCCAGTTGTTTACCGGCAAAGATTAAACGTTGT 422056
Query 33631 TGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTC 33689
|||||| | || | ||||||||||| ||| || | || ||||| || | || ||
Sbjct 422055 TGATCTGGGGGGATTCCTTCTTTGTCTTGAATCTT-AGCTTTAACATTTTCAATAGTATC 421997
Query 33690 GCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
| || ||| || || | ||||| || || || || || || || || ||||| |||||
Sbjct 421996 GGATGGTTCAACCTCCAGAGTGATGGTCTTGCCAGTCAAGGTCTTCACGAAGATTTGCAT 421937
Score = 113 bits (124), Expect = 3e-20
Identities = 164/229 (72%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||| | || |||| || |||||||||||| || || || || || || |||||
Sbjct 422392 ACCACCACGTAAGCGTAGAACTAAATGTAGAGTGGATTCCTTCTGAATATTATAGTCGGA 422333
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
||||||||| | || ||||| ||||| || || ||||||||||| || |||||| | ||
Sbjct 422332 CAGTGTGCGTCCATCCTCCAACTGTTTGCCAGCGAAAATCAAACGTTGTTGATCTGGGGG 422273
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| ||||| || || |||||| | || |||| || | || ||| | || |
Sbjct 422272 GATTCCTTCCTTATCTTGAATTTT-AGCTTTGACATTCTCAATTGTATCGGAAGGCTCAA 422214
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
| || | ||||| ||||| || || || ||||| || || ||||||||
Sbjct 422213 CCTCCAAAGTGATGGTTTTTCCCGTCAAAGTTTTGACGAAAATCTGCAT 422165
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 328675292430720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |