Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20dorsalis_20[refseq_20GCF_5F000789215.1_202014-12-03]
7,166 sequences; 414,984,608 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq7156 122 8e-23
seq7104 105 6e-18
seq3141 102 8e-17
>seq7156
Length=3407544
Score = 122 bits (134), Expect = 8e-23
Identities = 156/215 (73%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968
|||| ||||||||| | | ||||||| ||||| |||||||||||| || ||| || |
Sbjct 1526520 CGCAGAACCAAATGGAGGGTTGACTCCTTTTGGATGTTGTAGTCGGACAAGGTGCGACCA 1526579
Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028
||||| | ||||| |||| |||| | ||||||||||||||| || || || |||||
Sbjct 1526580 TCTTCCAATTGTTTTCCGGCGAAGATCAAACGCTGTTGATCTGGGGGGATACCCTCTTTG 1526639
Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088
|| ||||| ||| | | ||| | || || | ||||| || || | || |
Sbjct 1526640 TCTTGGATTTTAGCTTTGACATTTTCGATGGTGTCAGAAGGCTCGACCTCTAAGGTGATG 1526699
Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
|| |||||||| | ||||| | ||||||||||||
Sbjct 1526700 GTCTTACCAGTTAAGGTTTTGACGAAAATCTGCAT 1526734
>seq7104
Length=1453772
Score = 105 bits (116), Expect = 6e-18
Identities = 157/223 (70%), Gaps = 0/223 (0%)
Strand=Plus/Minus
Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961
||| ||||| | ||| ||||||| | || || || ||||| || |||||| || ||
Sbjct 422386 ACGTAAGCGTAGAACTAAATGTAGAGTGGATTCCTTCTGAATATTATAGTCGGACAGTGT 422327
Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021
|| ||| || | |||||| || | | || | ||| ||||||||||| || || ||
Sbjct 422326 GCGTCCATCCTCCAACTGTTTGCCAGCGAAAATCAAACGTTGTTGATCTGGGGGGATTCC 422267
Query 132022 TTCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGAC 132081
||| ||||| |||||| ||| | | || | ||||||| ||||| || || |
Sbjct 422266 TTCCTTATCTTGAATTTTAGCTTTGACATTCTCAATTGTATCGGAAGGCTCAACCTCCAA 422207
Query 132082 CGTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCATG 132124
|| | ||||| || |||| |||||| | |||||||||||||
Sbjct 422206 AGTGATGGTTTTTCCCGTCAAAGTTTTGACGAAAATCTGCATG 422164
Score = 104 bits (114), Expect = 2e-17
Identities = 149/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 131914 AACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTC 131973
||||||||| | | ||||| || || |||||||| ||| || || || |||||
Sbjct 422146 AACCAAATGAAGTGTAGACTCCTTCTGGATGTTGTAATCGGACAGAGTGCGTCCGTCTTC 422087
Query 131974 GAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGT 132033
|| |||||||||| | |||||| ||| ||||||||||| || || |||||||| ||
Sbjct 422086 CAGTTGTTTACCGGCAAAGATTAAACGTTGTTGATCTGGGGGGATTCCTTCTTTGTCTTG 422027
Query 132034 AATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTT 132093
||| || ||| | | ||| | |||||||| || || || || | || | || ||
Sbjct 422026 AATCTTAGCTTTAACATTTTCAATAGTATCGGATGGTTCAACCTCCAGAGTGATGGTCTT 421967
Query 132094 ACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
||||||| || || | ||| || |||||
Sbjct 421966 GCCAGTCAAGGTCTTCACGAAGATTTGCAT 421937
>seq3141
Length=2848
Score = 102 bits (112), Expect = 8e-17
Identities = 139/194 (72%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989
|||||||| ||||| || ||||| || || || |||||| | || || ||||
Sbjct 1537 GACTCTTTCTGAATATTATAGTCAGCCAATGTGCGACCATCTTCCAATTGCTTTCCGGCG 1478
Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049
| ||||||||||||||||| || || || ||||| ||||| |||||| || |
Sbjct 1477 AAAATTAGACGCTGTTGATCAGGCGGAATTCCTTCCTTATCTTGAATTTTGGACTTAACA 1418
Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109
||||| | |||||| | ||||| || || | || | || ||||| || || ||||||
Sbjct 1417 TGTTCAATAGTATCCGAAGGCTCAACCTCAAGAGTGATGGTCTTACCCGTAAGGGTTTTT 1358
Query 132110 ATGAAAATCTGCAT 132123
| |||||| |||||
Sbjct 1357 ACGAAAATTTGCAT 1344
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476568507551760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |