Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20dorsalis_20[refseq_20GCF_5F000789215.1_202014-12-03]
7,166 sequences; 414,984,608 total letters
Query= NC_026141.2
Length=4988
Score E
Sequences producing significant alignments: (Bits) Value
seq7121 102 3e-18
seq7112 98.7 3e-17
seq6789 98.7 3e-17
>seq7121
Length=2077930
Score = 102 bits (112), Expect = 3e-18
Identities = 71/80 (89%), Gaps = 2/80 (3%)
Strand=Plus/Minus
Query 2763 TTTATG--GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTG 2820
|||||| || ||| |||||||||||||||||| |||||||||||||||||||||||| |
Sbjct 331107 TTTATGTAGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCCG 331048
Query 2821 GTTCAACCCCGGGCTTCAGC 2840
|||||| |||||| ||| ||
Sbjct 331047 GTTCAATCCCGGGTTTCGGC 331028
>seq7112
Length=1874004
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||| ||||||| |
Sbjct 1473474 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCCGGTTCAATC 1473415
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 1473414 CCGGGTTTCGGC 1473403
>seq6789
Length=177003
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||| ||||||| |
Sbjct 15325 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCCGGTTCAATC 15384
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 15385 CCGGGTTTCGGC 15396
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||| ||||||| |
Sbjct 15796 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCCGGTTCAATC 15737
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 15736 CCGGGTTTCGGC 15725
Score = 98.7 bits (108), Expect = 3e-17
Identities = 63/69 (91%), Gaps = 0/69 (0%)
Strand=Plus/Plus
Query 2772 GAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCG 2831
||| |||||||||||||||||| |||||||||||||||||||||||| ||||||| ||||
Sbjct 21388 GAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCCGGTTCAATCCCG 21447
Query 2832 GGCTTCAGC 2840
|| ||| ||
Sbjct 21448 GGTTTCGGC 21456
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15848357738070
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |