Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20dorsalis_20[refseq_20GCF_5F000789215.1_202014-12-03]
7,166 sequences; 414,984,608 total letters
Query= NC_026268.1
Length=139132
Score E
Sequences producing significant alignments: (Bits) Value
seq7084 102 7e-17
>seq7084
Length=1258986
Score = 102 bits (112), Expect = 7e-17
Identities = 435/678 (64%), Gaps = 17/678 (3%)
Strand=Plus/Plus
Query 136638 CACGGTGAATTGGATTGTATTCGCGGCAGGTTTAGTTCTCAGATAGTACATGCCCGTCTT 136697
||| || ||||| || | ||| || || ||||| || | || ||| ||||||||||||||
Sbjct 1546 CACAGTAAATTGTATAGCATTTGCAGCTGGTTTCGTACGCAAATAATACATGCCCGTCTT 1605
Query 136698 TAAACCCTTCTCCCAGGAATAATTATGTATAGATGACAAAATTTTATAGCTCGGATCGGC 136757
| ||| || |||| || ||||||||| | | | |||| | || || ||
Sbjct 1606 GAGACCTGCCTTCCAGCCGTAGAAATGTATAGAAGTAAGCTTGCCATAGTTGGGCTCAGC 1665
Query 136758 CACGAAAAGATTTAGCGATTGGCTCTGATCGATGTAAGGTCCGCGGTCTGCGGCCATGTT 136817
|||| | || | ||| || |||||||||||| | | ||||| ||||| ||||| ||
Sbjct 1666 CACGTGTATGTTGAACGACTGACTCTGATCGATGAATGCACCGCGATCTGCAGCCAT-TT 1724
Query 136818 CAATAGTACTTTTTGC-TTAATTTCCCAAGCGGTTTTAAAGAGCTCCTTGACATTGGGCG 136876
||| | |||| | ||| |||||| | ||||| | || || | | | |
Sbjct 1725 TAATCGAGGTTTTCACGGAAATCTCCCAAACAGTTTTGTATAGATCGCGTATGTGCTGTG 1784
Query 136877 GAATTTCATCGATATTCTGTACAGATCCG---TTGTTTTTGATGATTTTCATCATGAGAT 136933
| || || |||| |||| || ||| || || | || | || |||| ||
Sbjct 1785 GTATGGATTCAATATGTTGTATGGAGCCGCGACTGGTTATAATATTATTTTTCATATCAT 1844
Query 136934 CAGTCGAGTATACGTTGCTCTCTATGA--GTTTATCGACGAGATGCTGATTTACTACTTG 136991
|| || | || ||| | || | || || || || |||||||| |||||
Sbjct 1845 CA-TCCCACAAACCCAACTCGGTTAGATCGCGTA---ACAAG-TGATGATTTACAACTTG 1899
Query 136992 ATATTCGCCCGATAGCACTCTGCGTACGTACAGATTACTAGTGAACGGCTCGAACGATTC 137051
| |||| ||||| ||||| | ||| || | |||| |||| |||| || || || ||
Sbjct 1900 AAATTCACCCGAAAGCACACGACGTGTATAAATATTAGAAGTGTACGGTTCAAATGACTC 1959
Query 137052 GTTGTTACCCAAAATCTGTGCAGTCGTCGCTGTCGGCATGTAAGCGATCAACAATGAATT 137111
||||| |||| ||| || ||||| | || || |||||| || | || ||| || ||
Sbjct 1960 ATTGTTGCCCATAATTTGAGCAGTTGAAGCAGTTGGCATGGGCGCAAGCAGCAAAGAGTT 2019
Query 137112 CCGTAAACCGTGTACGGCCAATTGTTGCTTGAGCTCTTTCCAGTTCCACAGATTGTTCGA 137171
|| | ||| ||| | || | ||| | || |||| ||||| ||| ||
Sbjct 2020 GCGGATACCATGTTGCTTTATTTTCTCCTTCAATTCGGTCCAATTCCAAAGA----TCAG 2075
Query 137172 TTGG-GTTATATTCCACAAATCAAACTGCAAAAGTCCGCGACTTGCAGGACTTTCTGCAT 137230
|||| ||| ||| ||||| ||| |||| |||| || ||| | || || ||
Sbjct 2076 TTGGTGTTTTATCCCACATGTCATACTGTAAAATACCCTTACTAACGGGTGAACCTTTAT 2135
Query 137231 AAGAATCATATGTTCCGTGCAGTTTCGCCAGTTCAATACTCTGGACTAGTGCGCCATAGT 137290
| | ||||| || || | || || | ||| ||| | | |||||||||||
Sbjct 2136 ACGTTTCATAGGTGCCATATTTTTCAGCTAATTCGCAACTGGCTTCCAATGCGCCATAGT 2195
Query 137291 AAATAGTTTCGGAGATTT 137308
||||||||||| | ||||
Sbjct 2196 AAATAGTTTCGAATATTT 2213
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445054530669120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |