Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20dorsalis_20[refseq_20GCF_5F000789215.1_202014-12-03] 7,166 sequences; 414,984,608 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq7084 102 7e-17 >seq7084 Length=1258986 Score = 102 bits (112), Expect = 7e-17 Identities = 435/678 (64%), Gaps = 17/678 (3%) Strand=Plus/Plus Query 136638 CACGGTGAATTGGATTGTATTCGCGGCAGGTTTAGTTCTCAGATAGTACATGCCCGTCTT 136697 ||| || ||||| || | ||| || || ||||| || | || ||| |||||||||||||| Sbjct 1546 CACAGTAAATTGTATAGCATTTGCAGCTGGTTTCGTACGCAAATAATACATGCCCGTCTT 1605 Query 136698 TAAACCCTTCTCCCAGGAATAATTATGTATAGATGACAAAATTTTATAGCTCGGATCGGC 136757 | ||| || |||| || ||||||||| | | | |||| | || || || Sbjct 1606 GAGACCTGCCTTCCAGCCGTAGAAATGTATAGAAGTAAGCTTGCCATAGTTGGGCTCAGC 1665 Query 136758 CACGAAAAGATTTAGCGATTGGCTCTGATCGATGTAAGGTCCGCGGTCTGCGGCCATGTT 136817 |||| | || | ||| || |||||||||||| | | ||||| ||||| ||||| || Sbjct 1666 CACGTGTATGTTGAACGACTGACTCTGATCGATGAATGCACCGCGATCTGCAGCCAT-TT 1724 Query 136818 CAATAGTACTTTTTGC-TTAATTTCCCAAGCGGTTTTAAAGAGCTCCTTGACATTGGGCG 136876 ||| | |||| | ||| |||||| | ||||| | || || | | | | Sbjct 1725 TAATCGAGGTTTTCACGGAAATCTCCCAAACAGTTTTGTATAGATCGCGTATGTGCTGTG 1784 Query 136877 GAATTTCATCGATATTCTGTACAGATCCG---TTGTTTTTGATGATTTTCATCATGAGAT 136933 | || || |||| |||| || ||| || || | || | || |||| || Sbjct 1785 GTATGGATTCAATATGTTGTATGGAGCCGCGACTGGTTATAATATTATTTTTCATATCAT 1844 Query 136934 CAGTCGAGTATACGTTGCTCTCTATGA--GTTTATCGACGAGATGCTGATTTACTACTTG 136991 || || | || ||| | || | || || || || |||||||| ||||| Sbjct 1845 CA-TCCCACAAACCCAACTCGGTTAGATCGCGTA---ACAAG-TGATGATTTACAACTTG 1899 Query 136992 ATATTCGCCCGATAGCACTCTGCGTACGTACAGATTACTAGTGAACGGCTCGAACGATTC 137051 | |||| ||||| ||||| | ||| || | |||| |||| |||| || || || || Sbjct 1900 AAATTCACCCGAAAGCACACGACGTGTATAAATATTAGAAGTGTACGGTTCAAATGACTC 1959 Query 137052 GTTGTTACCCAAAATCTGTGCAGTCGTCGCTGTCGGCATGTAAGCGATCAACAATGAATT 137111 ||||| |||| ||| || ||||| | || || |||||| || | || ||| || || Sbjct 1960 ATTGTTGCCCATAATTTGAGCAGTTGAAGCAGTTGGCATGGGCGCAAGCAGCAAAGAGTT 2019 Query 137112 CCGTAAACCGTGTACGGCCAATTGTTGCTTGAGCTCTTTCCAGTTCCACAGATTGTTCGA 137171 || | ||| ||| | || | ||| | || |||| ||||| ||| || Sbjct 2020 GCGGATACCATGTTGCTTTATTTTCTCCTTCAATTCGGTCCAATTCCAAAGA----TCAG 2075 Query 137172 TTGG-GTTATATTCCACAAATCAAACTGCAAAAGTCCGCGACTTGCAGGACTTTCTGCAT 137230 |||| ||| ||| ||||| ||| |||| |||| || ||| | || || || Sbjct 2076 TTGGTGTTTTATCCCACATGTCATACTGTAAAATACCCTTACTAACGGGTGAACCTTTAT 2135 Query 137231 AAGAATCATATGTTCCGTGCAGTTTCGCCAGTTCAATACTCTGGACTAGTGCGCCATAGT 137290 | | ||||| || || | || || | ||| ||| | | ||||||||||| Sbjct 2136 ACGTTTCATAGGTGCCATATTTTTCAGCTAATTCGCAACTGGCTTCCAATGCGCCATAGT 2195 Query 137291 AAATAGTTTCGGAGATTT 137308 ||||||||||| | |||| Sbjct 2196 AAATAGTTTCGAATATTT 2213 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445054530669120