Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20dorsalis_20[refseq_20GCF_5F000789215.1_202014-12-03] 7,166 sequences; 414,984,608 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq7104 143 3e-29 seq7156 131 2e-25 seq7084 109 6e-19 seq3141 104 2e-17 >seq7104 Length=1453772 Score = 143 bits (158), Expect = 3e-29 Identities = 156/205 (76%), Gaps = 4/205 (2%) Strand=Plus/Minus Query 134511 TGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAG--TCGTCGAGCT 134568 ||||| ||||||||||| ||||| || |||||| || ||||| | || || | || Sbjct 422367 TGTAGAGTGGATTCCTTCTGAATATTATAGTCGG--ACAGTGTGCGTCCATCCTCCAACT 422310 Query 134569 GTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTT 134628 ||||||| || ||||||||||| || ||||| || || || ||||| || |||||||||| Sbjct 422309 GTTTGCCAGCGAAAATCAAACGTTGTTGATCTGGGGGGATTCCTTCCTTATCTTGAATTT 422250 Query 134629 TTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGG 134688 | |||||| || | ||| ||||| | || || || | ||| |||||||| || | Sbjct 422249 TAGCTTTGACATTCTCAATTGTATCGGAAGGCTCAACCTCCAAAGTGATGGTTTTTCCCG 422190 Query 134689 TTAAAGTTTTAACGAAAATTTGCAT 134713 | |||||||| |||||||| ||||| Sbjct 422189 TCAAAGTTTTGACGAAAATCTGCAT 422165 Score = 116 bits (128), Expect = 4e-21 Identities = 150/207 (72%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 134511 TGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGT 134570 || || || || ||||| || |||||||| ||| | ||| | ||| || || ||| Sbjct 422139 TGAAGTGTAGACTCCTTCTGGATGTTGTAATCGGACAGAGTGCGTCCGTCTTCCAGTTGT 422080 Query 134571 TTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTT 134630 || || ||||| || ||||| || ||||| || || || |||||||| |||||||| || Sbjct 422079 TTACCGGCAAAGATTAAACGTTGTTGATCTGGGGGGATTCCTTCTTTGTCTTGAATCTTA 422020 Query 134631 TGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTT 134690 ||| || || | || ||||| | ||| || || ||||| ||||| || || || Sbjct 422019 GCTTTAACATTTTCAATAGTATCGGATGGTTCAACCTCCAGAGTGATGGTCTTGCCAGTC 421960 Query 134691 AAAGTTTTAACGAAAATTTGCATTTTG 134717 || || || ||||| |||||||||||| Sbjct 421959 AAGGTCTTCACGAAGATTTGCATTTTG 421933 Score = 82.4 bits (90), Expect = 8e-11 Identities = 86/113 (76%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 134601 GGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGAT 134660 || || || || || || || ||||||||| ||| || || | ||| ||||| | | Sbjct 422505 GGAGGAATACCCTCCTTGTCCTGAATTTTTGCTTTAACGTTTTCAATTGTATCGGAAGGT 422446 Query 134661 TCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || || ||||| |||||||| || |||||||||||||| |||||||| Sbjct 422445 TCAACCTCCAGCGTAATTGTTTTACCCGTCAAAGTTTTAACGAAGATTTGCAT 422393 >seq7156 Length=3407544 Score = 131 bits (144), Expect = 2e-25 Identities = 153/207 (74%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 134511 TGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGT 134570 || || || || |||||||| |||||||||||| | |||| || || || | ||| Sbjct 1526532 TGGAGGGTTGACTCCTTTTGGATGTTGTAGTCGGACAAGGTGCGACCATCTTCCAATTGT 1526591 Query 134571 TTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTT 134630 || || || || ||||||||||| ||||| || || || || ||||| ||||| ||||| Sbjct 1526592 TTTCCGGCGAAGATCAAACGCTGTTGATCTGGGGGGATACCCTCTTTGTCTTGGATTTTA 1526651 Query 134631 TGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTT 134690 |||||| || | ||||| || | || || || | || ||||| ||||| ||| Sbjct 1526652 GCTTTGACATTTTCGATGGTGTCAGAAGGCTCGACCTCTAAGGTGATGGTCTTACCAGTT 1526711 Query 134691 AAAGTTTTAACGAAAATTTGCATTTTG 134717 || ||||| |||||||| ||||||||| Sbjct 1526712 AAGGTTTTGACGAAAATCTGCATTTTG 1526738 >seq7084 Length=1258986 Score = 109 bits (120), Expect = 6e-19 Identities = 369/564 (65%), Gaps = 17/564 (3%) Strand=Plus/Minus Query 7564 CAACACATGCTGTTGCGCGTGGCGGTGGGCATTCACGGCGAAGACATTGACGCCGCCTTG 7623 || || ||| | |||| || || | || || || ||||||||||| || || || | Sbjct 3067 CAGCATATGTTAATGCGTGTTGCCATCGGTATACATGGCGAAGACATCGATGCAGCAATC 3008 Query 7624 GAAACGTACCAAATGATGTCTTTGAAAC--AGTTTACGCACGCTTCGCCCACCATGTTTG 7681 ||||| ||| | || | || ||| | ||||| || ||||| || || | || | Sbjct 3007 GAAACTTACAACTTGCTTTCC--GAACGTTATTTTACACATGCTTCTCCAACGCTTTTCG 2950 Query 7682 CCGCGGGCACAAACGCGCCTCAATTGTCCTCGTGTTTTTTGCTAACCATGCGCGAAGACA 7741 | || | ||| || ||| |||||||| || || ||| | || |||||| || || Sbjct 2949 CTGCTGCCACTAAGCAGCCGCAATTGTCATCATGCTTTCTACTGACCATGGTGGACGATT 2890 Query 7742 GCATCGACGGCATTTACAACACGCTGCGCG--ATTGCGCCAATATTTCCAAATACGGCGG 7799 ||| || || |||| || || |||| | | || || |||||||||| | || Sbjct 2889 CCATTGATGGTATTTTCA-CAT-CTGCACATCAATGTGCATTGATTTCCAAATCTGCTGG 2832 Query 7800 CGGAATAGGTCTGAACGTAAACGACGTGCGCGCCAACGGTAGCCGCA-TCGTGTCCACCA 7858 ||| || |||||||||||| | | | ||||| || || | | ||| | | | || | Sbjct 2831 CGGTATTGGTCTGAACGTACATTGCATACGCGCAAAAGGCA-CTGCAATTGCGGGTACAA 2773 Query 7859 ACGGAAAAGCCAGCGGTTTAGAGCCCATGTTGCGCGTGTTCAATAACGCGGTGCGACATG 7918 | | ||| | | ||||| | ||| |||||||| ||||||||||| | || ||| Sbjct 2772 ATAGCAAATCAAATGGTTTGGTGCCTATGTTGCGAGTGTTCAATAATATAGCACGCTATG 2713 Query 7919 TAGACCAGGGG---GGAAAGCGCAAAGGCGCCGCTGCCATCTATTTGGAGCCGTGGCACG 7975 | || || ||| || || || |||||| ||||||||| | || || ||||| | Sbjct 2712 TGGATCAAGGGTGCGGTAAACGGCCCGGCGCCTTTGCCATCTACCTCGAACCATGGCATG 2653 Query 7976 CGGACATTTACGCAGTGCTAAATCTGCGTCGCAACATGGGTTGCGAAGACAGCAAAGCGC 8035 | || |||| || | | | || || |||| ||| |||| |||| | || Sbjct 2652 CTGATATTTTCGAATTTTTGGATTTGAAGAAAAACACTGGTAAAGAAG--AGCATCGTGC 2595 Query 8036 --GCGATCTATTCTTCGGATTGTGGGTGCCCGATCTGTTTATGAGGCGCGTTCATTTCGA 8093 | ||| | |||| | |||||| | || ||||| ||||||| || || | ||| Sbjct 2594 CAGAGATTTGTTCTATGCCTTGTGGATACCTGATCTATTTATGAAACGTGTAGAAGCCGA 2535 Query 8094 CGCACAATGGTCGCTCATGTGCCC 8117 | | | |||||||| ||||| || Sbjct 2534 TGAAGACTGGTCGCTAATGTGTCC 2511 Score = 89.7 bits (98), Expect = 5e-13 Identities = 184/274 (67%), Gaps = 0/274 (0%) Strand=Plus/Minus Query 8651 AAATAGCGGAAACGGTGTATTACGGCGCATTAGAAGCCAGCTGTCAACTTGCCCGAGAAT 8710 ||||| ||||| | || || |||||||| |||||||| || || | || | ||| Sbjct 2213 AAATATTCGAAACTATTTACTATGGCGCATTGGAAGCCAGTTGCGAATTAGCTGAAAAAT 2154 Query 8711 TGGGCACGTACGAATCGTACGCGGGCAGCCCTGCCAGCCGCGGAATATTGCAATACGACA 8770 ||||| || ||| |||| || || | || || || || || || |||| Sbjct 2153 ATGGCACCTATGAAACGTATAAAGGTTCACCCGTTAGTAAGGGTATTTTACAGTATGACA 2094 Query 8771 TGTGGAATGTCACGCCCACCTCTTTGTGGAATTGGAGCGATTTGAAACGCAAAATTGCTC 8830 ||||| || || || || | | |||||||||| ||| ||||| ||||| | Sbjct 2093 TGTGGGATAAAACACCAACTGATCTTTGGAATTGGACCGAATTGAAGGAGAAAATAAAGC 2034 Query 8831 AATTCGGTTTGCGCAATTCGCTGTTGGTGGCTTACATGCCCACCGCCACGACTGCTCAAA 8890 || ||| | ||||| || || || | || |||||| || || | |||||||||| Sbjct 2033 AACATGGTATCCGCAACTCTTTGCTGCTTGCGCCCATGCCAACTGCTTCAACTGCTCAAA 1974 Query 8891 TAATGGGAAACAACGAATCCTTTGAGCCGTTCAC 8924 | ||||| ||||| || || ||||| |||| ||| Sbjct 1973 TTATGGGCAACAATGAGTCATTTGAACCGTACAC 1940 >seq3141 Length=2848 Score = 104 bits (114), Expect = 2e-17 Identities = 146/200 (73%), Gaps = 4/200 (2%) Strand=Plus/Minus Query 134517 GTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCC 134575 || || || || ||||| || ||||| ||||| | || || || || | || || || Sbjct 1540 GTAGACTCTTTCTGAATATTATAGTCAGCCAATG-TGCGACCATCTTCCAATTGCTTTCC 1482 Query 134576 TGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTT 134635 || ||||| | |||||| ||||| ||||| || ||||| || ||||||| |||| | | Sbjct 1481 GGCGAAAATTAGACGCTGTTGATCAGGCGGAATTCCTTCCTTATCTTGAA-TTTTGGACT 1423 Query 134636 GACCGCGTCCAAT-GTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAG 134694 | | || |||| || || || | || || || ||||| ||||| ||||| || | | Sbjct 1422 TAACATGTTCAATAGTATCCGAAGGCTCAACCTCAAGAGTGATGGTCTTACCCGTAAGGG 1363 Query 134695 TTTTAACGAAAATTTGCATT 134714 |||| ||||||||||||||| Sbjct 1362 TTTTTACGAAAATTTGCATT 1343 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505353128938320