Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20dorsalis_20[refseq_20GCF_5F000789215.1_202014-12-03]
7,166 sequences; 414,984,608 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq7104 143 3e-29
seq7156 131 2e-25
seq7084 109 6e-19
seq3141 104 2e-17
>seq7104
Length=1453772
Score = 143 bits (158), Expect = 3e-29
Identities = 156/205 (76%), Gaps = 4/205 (2%)
Strand=Plus/Minus
Query 134511 TGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAG--TCGTCGAGCT 134568
||||| ||||||||||| ||||| || |||||| || ||||| | || || | ||
Sbjct 422367 TGTAGAGTGGATTCCTTCTGAATATTATAGTCGG--ACAGTGTGCGTCCATCCTCCAACT 422310
Query 134569 GTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTT 134628
||||||| || ||||||||||| || ||||| || || || ||||| || ||||||||||
Sbjct 422309 GTTTGCCAGCGAAAATCAAACGTTGTTGATCTGGGGGGATTCCTTCCTTATCTTGAATTT 422250
Query 134629 TTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGG 134688
| |||||| || | ||| ||||| | || || || | ||| |||||||| || |
Sbjct 422249 TAGCTTTGACATTCTCAATTGTATCGGAAGGCTCAACCTCCAAAGTGATGGTTTTTCCCG 422190
Query 134689 TTAAAGTTTTAACGAAAATTTGCAT 134713
| |||||||| |||||||| |||||
Sbjct 422189 TCAAAGTTTTGACGAAAATCTGCAT 422165
Score = 116 bits (128), Expect = 4e-21
Identities = 150/207 (72%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 134511 TGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGT 134570
|| || || || ||||| || |||||||| ||| | ||| | ||| || || |||
Sbjct 422139 TGAAGTGTAGACTCCTTCTGGATGTTGTAATCGGACAGAGTGCGTCCGTCTTCCAGTTGT 422080
Query 134571 TTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTT 134630
|| || ||||| || ||||| || ||||| || || || |||||||| |||||||| ||
Sbjct 422079 TTACCGGCAAAGATTAAACGTTGTTGATCTGGGGGGATTCCTTCTTTGTCTTGAATCTTA 422020
Query 134631 TGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTT 134690
||| || || | || ||||| | ||| || || ||||| ||||| || || ||
Sbjct 422019 GCTTTAACATTTTCAATAGTATCGGATGGTTCAACCTCCAGAGTGATGGTCTTGCCAGTC 421960
Query 134691 AAAGTTTTAACGAAAATTTGCATTTTG 134717
|| || || ||||| ||||||||||||
Sbjct 421959 AAGGTCTTCACGAAGATTTGCATTTTG 421933
Score = 82.4 bits (90), Expect = 8e-11
Identities = 86/113 (76%), Gaps = 0/113 (0%)
Strand=Plus/Minus
Query 134601 GGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGAT 134660
|| || || || || || || ||||||||| ||| || || | ||| ||||| | |
Sbjct 422505 GGAGGAATACCCTCCTTGTCCTGAATTTTTGCTTTAACGTTTTCAATTGTATCGGAAGGT 422446
Query 134661 TCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || || || ||||| |||||||| || |||||||||||||| ||||||||
Sbjct 422445 TCAACCTCCAGCGTAATTGTTTTACCCGTCAAAGTTTTAACGAAGATTTGCAT 422393
>seq7156
Length=3407544
Score = 131 bits (144), Expect = 2e-25
Identities = 153/207 (74%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 134511 TGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGT 134570
|| || || || |||||||| |||||||||||| | |||| || || || | |||
Sbjct 1526532 TGGAGGGTTGACTCCTTTTGGATGTTGTAGTCGGACAAGGTGCGACCATCTTCCAATTGT 1526591
Query 134571 TTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTT 134630
|| || || || ||||||||||| ||||| || || || || ||||| ||||| |||||
Sbjct 1526592 TTTCCGGCGAAGATCAAACGCTGTTGATCTGGGGGGATACCCTCTTTGTCTTGGATTTTA 1526651
Query 134631 TGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTT 134690
|||||| || | ||||| || | || || || | || ||||| ||||| |||
Sbjct 1526652 GCTTTGACATTTTCGATGGTGTCAGAAGGCTCGACCTCTAAGGTGATGGTCTTACCAGTT 1526711
Query 134691 AAAGTTTTAACGAAAATTTGCATTTTG 134717
|| ||||| |||||||| |||||||||
Sbjct 1526712 AAGGTTTTGACGAAAATCTGCATTTTG 1526738
>seq7084
Length=1258986
Score = 109 bits (120), Expect = 6e-19
Identities = 369/564 (65%), Gaps = 17/564 (3%)
Strand=Plus/Minus
Query 7564 CAACACATGCTGTTGCGCGTGGCGGTGGGCATTCACGGCGAAGACATTGACGCCGCCTTG 7623
|| || ||| | |||| || || | || || || ||||||||||| || || || |
Sbjct 3067 CAGCATATGTTAATGCGTGTTGCCATCGGTATACATGGCGAAGACATCGATGCAGCAATC 3008
Query 7624 GAAACGTACCAAATGATGTCTTTGAAAC--AGTTTACGCACGCTTCGCCCACCATGTTTG 7681
||||| ||| | || | || ||| | ||||| || ||||| || || | || |
Sbjct 3007 GAAACTTACAACTTGCTTTCC--GAACGTTATTTTACACATGCTTCTCCAACGCTTTTCG 2950
Query 7682 CCGCGGGCACAAACGCGCCTCAATTGTCCTCGTGTTTTTTGCTAACCATGCGCGAAGACA 7741
| || | ||| || ||| |||||||| || || ||| | || |||||| || ||
Sbjct 2949 CTGCTGCCACTAAGCAGCCGCAATTGTCATCATGCTTTCTACTGACCATGGTGGACGATT 2890
Query 7742 GCATCGACGGCATTTACAACACGCTGCGCG--ATTGCGCCAATATTTCCAAATACGGCGG 7799
||| || || |||| || || |||| | | || || |||||||||| | ||
Sbjct 2889 CCATTGATGGTATTTTCA-CAT-CTGCACATCAATGTGCATTGATTTCCAAATCTGCTGG 2832
Query 7800 CGGAATAGGTCTGAACGTAAACGACGTGCGCGCCAACGGTAGCCGCA-TCGTGTCCACCA 7858
||| || |||||||||||| | | | ||||| || || | | ||| | | | || |
Sbjct 2831 CGGTATTGGTCTGAACGTACATTGCATACGCGCAAAAGGCA-CTGCAATTGCGGGTACAA 2773
Query 7859 ACGGAAAAGCCAGCGGTTTAGAGCCCATGTTGCGCGTGTTCAATAACGCGGTGCGACATG 7918
| | ||| | | ||||| | ||| |||||||| ||||||||||| | || |||
Sbjct 2772 ATAGCAAATCAAATGGTTTGGTGCCTATGTTGCGAGTGTTCAATAATATAGCACGCTATG 2713
Query 7919 TAGACCAGGGG---GGAAAGCGCAAAGGCGCCGCTGCCATCTATTTGGAGCCGTGGCACG 7975
| || || ||| || || || |||||| ||||||||| | || || ||||| |
Sbjct 2712 TGGATCAAGGGTGCGGTAAACGGCCCGGCGCCTTTGCCATCTACCTCGAACCATGGCATG 2653
Query 7976 CGGACATTTACGCAGTGCTAAATCTGCGTCGCAACATGGGTTGCGAAGACAGCAAAGCGC 8035
| || |||| || | | | || || |||| ||| |||| |||| | ||
Sbjct 2652 CTGATATTTTCGAATTTTTGGATTTGAAGAAAAACACTGGTAAAGAAG--AGCATCGTGC 2595
Query 8036 --GCGATCTATTCTTCGGATTGTGGGTGCCCGATCTGTTTATGAGGCGCGTTCATTTCGA 8093
| ||| | |||| | |||||| | || ||||| ||||||| || || | |||
Sbjct 2594 CAGAGATTTGTTCTATGCCTTGTGGATACCTGATCTATTTATGAAACGTGTAGAAGCCGA 2535
Query 8094 CGCACAATGGTCGCTCATGTGCCC 8117
| | | |||||||| ||||| ||
Sbjct 2534 TGAAGACTGGTCGCTAATGTGTCC 2511
Score = 89.7 bits (98), Expect = 5e-13
Identities = 184/274 (67%), Gaps = 0/274 (0%)
Strand=Plus/Minus
Query 8651 AAATAGCGGAAACGGTGTATTACGGCGCATTAGAAGCCAGCTGTCAACTTGCCCGAGAAT 8710
||||| ||||| | || || |||||||| |||||||| || || | || | |||
Sbjct 2213 AAATATTCGAAACTATTTACTATGGCGCATTGGAAGCCAGTTGCGAATTAGCTGAAAAAT 2154
Query 8711 TGGGCACGTACGAATCGTACGCGGGCAGCCCTGCCAGCCGCGGAATATTGCAATACGACA 8770
||||| || ||| |||| || || | || || || || || || ||||
Sbjct 2153 ATGGCACCTATGAAACGTATAAAGGTTCACCCGTTAGTAAGGGTATTTTACAGTATGACA 2094
Query 8771 TGTGGAATGTCACGCCCACCTCTTTGTGGAATTGGAGCGATTTGAAACGCAAAATTGCTC 8830
||||| || || || || | | |||||||||| ||| ||||| ||||| |
Sbjct 2093 TGTGGGATAAAACACCAACTGATCTTTGGAATTGGACCGAATTGAAGGAGAAAATAAAGC 2034
Query 8831 AATTCGGTTTGCGCAATTCGCTGTTGGTGGCTTACATGCCCACCGCCACGACTGCTCAAA 8890
|| ||| | ||||| || || || | || |||||| || || | ||||||||||
Sbjct 2033 AACATGGTATCCGCAACTCTTTGCTGCTTGCGCCCATGCCAACTGCTTCAACTGCTCAAA 1974
Query 8891 TAATGGGAAACAACGAATCCTTTGAGCCGTTCAC 8924
| ||||| ||||| || || ||||| |||| |||
Sbjct 1973 TTATGGGCAACAATGAGTCATTTGAACCGTACAC 1940
>seq3141
Length=2848
Score = 104 bits (114), Expect = 2e-17
Identities = 146/200 (73%), Gaps = 4/200 (2%)
Strand=Plus/Minus
Query 134517 GTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCC 134575
|| || || || ||||| || ||||| ||||| | || || || || | || || ||
Sbjct 1540 GTAGACTCTTTCTGAATATTATAGTCAGCCAATG-TGCGACCATCTTCCAATTGCTTTCC 1482
Query 134576 TGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTT 134635
|| ||||| | |||||| ||||| ||||| || ||||| || ||||||| |||| | |
Sbjct 1481 GGCGAAAATTAGACGCTGTTGATCAGGCGGAATTCCTTCCTTATCTTGAA-TTTTGGACT 1423
Query 134636 GACCGCGTCCAAT-GTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAG 134694
| | || |||| || || || | || || || ||||| ||||| ||||| || | |
Sbjct 1422 TAACATGTTCAATAGTATCCGAAGGCTCAACCTCAAGAGTGATGGTCTTACCCGTAAGGG 1363
Query 134695 TTTTAACGAAAATTTGCATT 134714
|||| |||||||||||||||
Sbjct 1362 TTTTTACGAAAATTTGCATT 1343
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505353128938320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |