Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20dorsalis_20[refseq_20GCF_5F000789215.1_202014-12-03]
7,166 sequences; 414,984,608 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq7155 280 2e-70
seq7084 266 4e-66
>seq7155
Length=3116674
Score = 280 bits (310), Expect = 2e-70
Identities = 492/713 (69%), Gaps = 9/713 (1%)
Strand=Plus/Plus
Query 39442 AATCAATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTAT 39501
|| ||| | ||| || |||||||| || || ||| | || |||||||| || ||
Sbjct 2758585 AAGCAAACGATCAGCCACAAATTCGATATAATCGGACATTAGTTTGCAATTCATACCGAT 2758644
Query 39502 GAGTTTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCTGTTAT 39561
| || || || | ||| || |||| || || | || || | || || || | ||
Sbjct 2758645 TAAATTCACCGGCAAAGCGTCAGTTAAGAATTCCTGCTCAATTTTAACAGCTTCAGAAAT 2758704
Query 39562 TAT--CGATGTTACTACCTCATCACTCGGTGGATGCAATAAATGTTTAAACATTAAGCAG 39619
||| | | ||| ||||| ||| ||| || | |||||||| ||||| || ||
Sbjct 2758705 TATTTCAACAATACG--CTCATTACTTGGTTTTTGTATTAAATGTTGGAACATCAAACAT 2758762
Query 39620 GCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCA 39679
|||||||||||||| || |||||||||| ||||| ||| || |||||||| | ||
Sbjct 2758763 GCGAAGTCACAATGAAGTCCCTCATCTCGTGAAATTAGTTCATTGGAAAATGTCAAGCCT 2758822
Query 39680 GGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATG 39739
||||||| |||||| || || ||||| || || | ||||||| ||| ||||||||
Sbjct 2758823 GGCATTAAACCACGTTTCTTAAGCCAGAAGATCGAAGCAAAACTGCCACTGAAGAAGATA 2758882
Query 39740 CCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCATTATGT----AT 39795
||||| || || |||||||||| | | || || || ||| | | | | ||
Sbjct 2758883 CCTTCAACGGCAGCAAATGCAATTACACGTTCACCA-AAGTTGGCTGACTTCGAGGAAAT 2758941
Query 39796 CCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAA 39855
||| | |||||||| || || |||||| ||||||||| ||||||||||| ||
Sbjct 2758942 CCAAGCAAGCGCCCAATCTGCCTTGCGCTTTACGGCAGGCATTGTCTCTATAGCATTGAA 2759001
Query 39856 GAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACATTTC 39915
| |||| ||| | || |||| ||||||||| ||||| | |||||||||||
Sbjct 2759002 TAAGTAATTCCTTTGTTTCGAGTCCTTAATATATGTATCAATTAATATGCTATACATTTC 2759061
Query 39916 TGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTG 39975
||||| | || || ||||| || |||||||| || || || | ||| || || | |||
Sbjct 2759062 AGAATGCACATTCTCCATCGCAATTTGAAATCCATAGAAGCAACGTGCCTCTGTCACTTG 2759121
Query 39976 TACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCAAA 40035
|| || || || | ||| | | |||||||||||| || |||||| ||||| ||
Sbjct 2759122 GACTTCCTGGCAGAAACGTTCAACTACATTTTCATTCACAATACCATCAGATGCGGCGAA 2759181
Query 40036 AAATGCCAATACATGTTTAATAAAATATTTTTCATCGGGTGTCAATTTATTCCAGTCATT 40095
||| || || || ||| |||||||| | ||||| || | ||| ||||
Sbjct 2759182 AAAGGCTAACACGTGTGAAATAAAATGTCGTTCATTATCAGTGAGACGTGCCCAATCATC 2759241
Query 40096 GATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCT 40148
|||||||| || | ||||||||| || ||||||| ||||| || |||||||
Sbjct 2759242 CATATCTTTAGAAAGATCTACTTCCTCTACTGTCCAGAACGATGCTTCTGCCT 2759294
>seq7084
Length=1258986
Score = 266 bits (294), Expect = 4e-66
Identities = 587/872 (67%), Gaps = 6/872 (1%)
Strand=Plus/Plus
Query 69325 ATCTCTGTACATAGATTACTACATTTGATAGTCCCCAGATTTTGCTGATTACTCTTTTTG 69384
|| || ||||||| ||||||||| || || || || | ||| || ||||||||||||
Sbjct 2274 ATTTCGGTACATAAATTACTACACTTAATTGTGCCAACATTCTGTTGATTACTCTTTCGA 2333
Query 69385 TTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCGATAATA 69444
||||| || || || || | || | || || || || || | || ||||| |||||
Sbjct 2334 TTACAAGCATCTTTATACAACATGTATGGTGTGCCGGTCTCCACTTGCGATTCAATAATG 2393
Query 69445 GATTTCCAAACGACCCTA-GCATTTATTACGGTCTTGTAACGCTTCTCTTTTTCATATTG 69503
||||| ||| | || |||||| | ||| ||| || | ||||||||
Sbjct 2394 CTAAACCAAA-GACTTTGTGCTTTTATTTTCTTATTGGCACGTCCTTCCTGTTCATATTT 2452
Query 69504 TGTATATAGCCGTTCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGG 69563
||||| | |||||| || || ||||| || |||| || || ||||| | | |||
Sbjct 2453 CAGATATAACTTTTCGAACTCTTCACCCCATACTTCATGTAAACCGGGACACTTGTGTGG 2512
Query 69564 ACACATCAATGACCACACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCA 69623
|||||| | ||||| | ||||| | | || ||||||||||||||||| || |||||
Sbjct 2513 ACACATTAGCGACCAGTCTTCATCGGCTTCTACACGTTTCATAAATAGATCAGGTATCCA 2572
Query 69624 AAGAGCTATA-AAGAGATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGAT 69682
| || ||| || | |||||||| | || ||||| || || || ||||| || | ||
Sbjct 2573 CA-AGGCATAGAACAAATCTCTGGCACGATGCTCTTCTTTACCAGTGTTTTTCTTCAAAT 2631
Query 69683 CGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTC 69742
| | ||| || | |||||||| |||||||||||| || || || || | | | || || |
Sbjct 2632 CCAAAAATTCGAAAATATCAGCATGCCATGGTTCGAGGTAGATGGCAAAGGCGCCGGGCC 2691
Query 69743 GTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAA 69802
||||| | || ||||| | || | || | ||||| | |||| || ||| || |
Sbjct 2692 GTTTACCGCACCCTTGATCCACATAGCGTGCTATATTATTGAACACTCGCAACATAGGCA 2751
Query 69803 TAATACCATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTAC 69862
| |||||| ||||| | |||||| || | ||| | | ||| ||||||| || |
Sbjct 2752 CCAAACCATTTGATTTGCTATTTGTACCCGCAATTGCAGTGCCTTTTGCGCGTATGCAAT 2811
Query 69863 TAATAGATAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACG-TTTCAATGTG 69921
| ||||| || || || || ||| || || | ||||| | | | | ||
Sbjct 2812 GTACGTTCAGACCAATACCGCCAGCAGATTTGGAAATCAATGCACATTGATGTGCAGATG 2871
Query 69922 TCATATATACCCTCTATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGA 69981
| | | ||||| || ||| ||| || | |||| | || ||||| || |||| |||
Sbjct 2872 TGA-AAATACCATCAATGGAATCGTCCACCATGGTCAGTAGAAAGCATGATGACAATTGC 2930
Query 69982 TGATGTATAGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAA 70041
| || |||| | ||| || | || ||||| || || || || | ||| |||
Sbjct 2931 GGCTGCTTAGTGGCAGCAGCGAAAAGCGTTGGAGAAGCATGTGTAAAATAACGTTCGGAA 2990
Query 70042 AGCAGATTGTATGTTTCAATAGCTGATTCTATATCCCACTGATGAATTCCTATCGCGACA 70101
|||| ||||| ||||| || |||| || || || ||| || || || || |||
Sbjct 2991 AGCAAGTTGTAAGTTTCGATTGCTGCATCGATGTCTTCGCCATGTATACCGATGGCAACA 3050
Query 70102 CGCATCAACATATGCTGAGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGAT 70161
||||| ||||||||||| ||||| || || |||| ||| | || | || || ||
Sbjct 3051 CGCATTAACATATGCTGTGGTCGCTCAACAATTTTGCCATTCAACTTTAGCAAATAGGAA 3110
Query 70162 TTTTCCAGAGTTTTAAACCCAAAATAGTTGTA 70193
||| || |||||||| |||||||| || ||
Sbjct 3111 CGTTCAAGTGTTTTAAAACCAAAATAATTATA 3142
Score = 260 bits (288), Expect = 2e-64
Identities = 454/654 (69%), Gaps = 11/654 (2%)
Strand=Plus/Plus
Query 68395 GCGGGTTTTGTACGTAGATAGTACATACCGGTTTTCAGACCTAGACTCCATCCGTAGAAA 68454
|| ||||| ||||| | ||| ||||| || || || |||||| |||| |||||||||
Sbjct 1571 GCTGGTTTCGTACGCAAATAATACATGCCCGTCTTGAGACCTGCCTTCCAGCCGTAGAAA 1630
Query 68455 TGCATACTTGTTAGTTTGGAATAACTTGGATCGGCTATATGAATATTCATCGATTGACTT 68514
|| ||| || || ||| ||| | || || || | || || || | ||| |||||
Sbjct 1631 TGTATAGAAGTAAGCTTGCCATAGTTGGGCTCAGCCACGTGTATGTTGAACGACTGACTC 1690
Query 68515 TGATCGATGAAAGCTCCTCTATCTGCCGCCATTTTTATAATACTCTTTTGAGGAATTTCC 68574
||||||||||| || || | |||||| |||||||| || | || | ||| |||
Sbjct 1691 TGATCGATGAATGCACCGCGATCTGCAGCCATTTTAATCGAGGTTTTCACGGAAATCTCC 1750
Query 68575 CAAATAGTCTT--AAAAATC---TGTTTGATATCATCTGGAAGGCTCG-TATTTTGAATG 68628
|||| ||| || | | ||| | | || | | | |||| || ||| ||| |||
Sbjct 1751 CAAACAGTTTTGTATAGATCGCGTATGTGCTGTGGTATGGAT---TCAATATGTTGTATG 1807
Query 68629 GATCCACCATCGGATATAATTATATTCTTGATCTCATCATTCCACAATTTTCTCTCCGTT 68688
|| || | | || |||||| |||| || || ||||||| |||||| ||| |||
Sbjct 1808 GAGCCGCGACTGGTTATAATATTATTTTTCATATCATCATCCCACAAACCCAACTCGGTT 1867
Query 68689 AAAACTC-TAAGGAGATGCGGATTAACTATTTGAAATTCCCCAGATAACACTCTACGAGT 68747
| | | | ||| || || |||| || | ||||||||| || || | ||| | ||| ||
Sbjct 1868 AGATCGCGTAACAAG-TGATGATTTACAACTTGAAATTCACCCGAAAGCACACGACGTGT 1926
Query 68748 GTAAATATTACTGGTATATGGTTCCACAGATTCATTATTTCCCAGAATTTGAGCAGTTGA 68807
||||||||| || || ||||| | || ||||| || |||| |||||||||||||||
Sbjct 1927 ATAAATATTAGAAGTGTACGGTTCAAATGACTCATTGTTGCCCATAATTTGAGCAGTTGA 1986
Query 68808 TGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCATGTGTTATGATTTTATC 68867
||||||||||| || || | || ||| || | | ||||||| | ||||| ||
Sbjct 1987 AGCAGTTGGCATGGGCGCAAGCAGCAAAGAGTTGCGGATACCATGTTGCTTTATTTTCTC 2046
Query 68868 TTTTAGATGTTTCCAATCCCAAAGATCAGATGGTACAACATTCCAAAGATCGTATTGTAG 68927
|| | | |||||| ||||||||||| |||| || ||| | || || ||||
Sbjct 2047 CTTCAATTCGGTCCAATTCCAAAGATCAGTTGGTGTTTTATCCCACATGTCATACTGTAA 2106
Query 68928 AATTCCGTTACTTGCATATGATCCATTATATGTTTCATAAGGTCCTTCCTGTTCAGCTAG 68987
||| || ||||| | ||| || ||||| |||||||| | || | | ||||||||
Sbjct 2107 AATACCCTTACTAACGGGTGAACCTTTATACGTTTCATAGGTGCCATATTTTTCAGCTAA 2166
Query 68988 TTCACAACTTGCCTCTAATGCACCGTAATAAATTGTTTCGAAAATCTTCTTATT 69041
||| ||||| || || ||||| || || ||||| |||||||| || | || |||
Sbjct 2167 TTCGCAACTGGCTTCCAATGCGCCATAGTAAATAGTTTCGAATATTTGCTGATT 2220
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686847270144240
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