Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20dorsalis_20[refseq_20GCF_5F000789215.1_202014-12-03]
7,166 sequences; 414,984,608 total letters
Query= NC_027916.2
Length=160358
Score E
Sequences producing significant alignments: (Bits) Value
seq7133 114 1e-20
>seq7133
Length=2056560
Score = 114 bits (126), Expect = 1e-20
Identities = 182/254 (72%), Gaps = 8/254 (3%)
Strand=Plus/Minus
Query 31154 CTTCGATGTGATTGACATAAATATGCGCATCGCCAATAGAGTGTACCAATTCCCCTGGTC 31213
|||| || ||||| ||| | ||| |||||||| | || ||| || || ||||||||||
Sbjct 1569234 CTTCAATATGATTATTATAGACATGTGCATCGCCCAAAGTGTGGACGAAATCCCCTGGTC 1569175
Query 31214 TTAGATGGGTCAATTTG-GCAATCACAT--GAACCAAAAGCGCATAACTCGCTATGTTGA 31270
|||| || ||| || ||||||| || | | |||||| | | || || || |
Sbjct 1569174 GGAGATCAGT-AATATGAGCAATCATATAGGTAAGCAAAGCGTACGAG--GCAATATTAA 1569118
Query 31271 ATGGTACACCCAATCCCAAATCGGCAGATCGTTGATATAACAAACAGGAAAGTTCATCTC 31330
|||||||||||||||||| ||||||| ||||| ||||| ||| || | || |
Sbjct 1569117 ATGGTACACCCAATCCCATATCGGCACTGCGTTGGTATAATTGACAAGATAACTCTCCAT 1569058
Query 31331 CGGTCACGTAAAATTG-AAATAACACATGACAAGGCGGCAAAGCCATTTCACAGGTATCG 31389
|| || ||||||| | ||| ||||||||| || | |||||||| | | |||||
Sbjct 1569057 TGGCAACAAAAAATTGTGCAAGACA-ATGACAAGGTGGTAGAGCCATTTGAGGGATATCG 1568999
Query 31390 ACGGGATTCCAAGC 31403
|| |||||||||||
Sbjct 1568998 ACAGGATTCCAAGC 1568985
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 512971646448480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |