Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20dorsalis_20[refseq_20GCF_5F000789215.1_202014-12-03] 7,166 sequences; 414,984,608 total letters Query= NC_027916.2 Length=160358 Score E Sequences producing significant alignments: (Bits) Value seq7133 114 1e-20 >seq7133 Length=2056560 Score = 114 bits (126), Expect = 1e-20 Identities = 182/254 (72%), Gaps = 8/254 (3%) Strand=Plus/Minus Query 31154 CTTCGATGTGATTGACATAAATATGCGCATCGCCAATAGAGTGTACCAATTCCCCTGGTC 31213 |||| || ||||| ||| | ||| |||||||| | || ||| || || |||||||||| Sbjct 1569234 CTTCAATATGATTATTATAGACATGTGCATCGCCCAAAGTGTGGACGAAATCCCCTGGTC 1569175 Query 31214 TTAGATGGGTCAATTTG-GCAATCACAT--GAACCAAAAGCGCATAACTCGCTATGTTGA 31270 |||| || ||| || ||||||| || | | |||||| | | || || || | Sbjct 1569174 GGAGATCAGT-AATATGAGCAATCATATAGGTAAGCAAAGCGTACGAG--GCAATATTAA 1569118 Query 31271 ATGGTACACCCAATCCCAAATCGGCAGATCGTTGATATAACAAACAGGAAAGTTCATCTC 31330 |||||||||||||||||| ||||||| ||||| ||||| ||| || | || | Sbjct 1569117 ATGGTACACCCAATCCCATATCGGCACTGCGTTGGTATAATTGACAAGATAACTCTCCAT 1569058 Query 31331 CGGTCACGTAAAATTG-AAATAACACATGACAAGGCGGCAAAGCCATTTCACAGGTATCG 31389 || || ||||||| | ||| ||||||||| || | |||||||| | | ||||| Sbjct 1569057 TGGCAACAAAAAATTGTGCAAGACA-ATGACAAGGTGGTAGAGCCATTTGAGGGATATCG 1568999 Query 31390 ACGGGATTCCAAGC 31403 || ||||||||||| Sbjct 1568998 ACAGGATTCCAAGC 1568985 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 512971646448480