Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20dorsalis_20[refseq_20GCF_5F000789215.1_202014-12-03] 7,166 sequences; 414,984,608 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq7164 89.7 6e-13 >seq7164 Length=6205789 Score = 89.7 bits (98), Expect = 6e-13 Identities = 163/239 (68%), Gaps = 0/239 (0%) Strand=Plus/Plus Query 181806 TCTTTACCACCCATGAGACGCGTACCAAATTGACCACATGGCTCAAGAAGGTTAATGTTG 181865 |||||||||||| ||||| ||||| |||||||||| ||||| | | ||||| || Sbjct 6011546 TCTTTACCACCCTGCAGACGTGTACCGAATTGACCACGGGGCTCCAATAAATTAATATTA 6011605 Query 181866 TTTGAACCTGTATAGTCGTTGGCCAACTTAACGATGGTATCCGCAAGGGACACTTCACCG 181925 ||||| || || | | ||||| || || |||||| || || |||| |||||| Sbjct 6011606 TTTGATCCCACGTAATTTTGCGCCAAATTGACTATGGTAGCCTGCAGTGACATCTCACCG 6011665 Query 181926 TGGTGGTAAGCTGACTTGTCCGCAACATATGCCGCCAACTGTGCCACCTTCATTTCATCT 181985 || ||||| || ||| | || || || | | | ||| || || || |||| ||| | Sbjct 6011666 TGATGGTAGGCGGACATTTCAGCCACTGAACCAGACAATTGCGCAACTTTCACCTCACGT 6011725 Query 181986 TTGAGGTTCTTGTGGAAGCAAGCATACATCACTTTCCTCTGCGAAGGCTTGAGACCATC 182044 ||| ||| | ||| || | | |||| ||||| | || ||||| | |||||| Sbjct 6011726 TTGTCGTTACGTTTGAAACAGGTAAACATAACTTTGCGTTGGCCTGGCTTAAAACCATC 6011784 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627975744033600