Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20dorsalis_20[refseq_20GCF_5F000789215.1_202014-12-03] 7,166 sequences; 414,984,608 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq7164 105 8e-18 >seq7164 Length=6205789 Score = 105 bits (116), Expect = 8e-18 Identities = 130/178 (73%), Gaps = 0/178 (0%) Strand=Plus/Plus Query 179064 ATCTTTGCCACCCATGAGACGCGTCCCAAATTGACCACATGGCTCAAGGAGATTGATATT 179123 |||||| |||||| ||||| || || |||||||||| ||||| | | ||| ||||| Sbjct 6011545 ATCTTTACCACCCTGCAGACGTGTACCGAATTGACCACGGGGCTCCAATAAATTAATATT 6011604 Query 179124 GTTTGAACCCATGTAGTCATTGGCCAACTTGACAATCGTATCCGCGAGGGAGACTTCACC 179183 ||||| |||| ||| | | ||||| ||||| || ||| || || || | ||||| Sbjct 6011605 ATTTGATCCCACGTAATTTTGCGCCAAATTGACTATGGTAGCCTGCAGTGACATCTCACC 6011664 Query 179184 GTGATGGTAAGCCGACTTGTCCGCCACATATGCCGCCAACTGCGCCACCTTCATCTCA 179241 ||||||||| || ||| | || ||||| | | | ||| ||||| || |||| |||| Sbjct 6011665 GTGATGGTAGGCGGACATTTCAGCCACTGAACCAGACAATTGCGCAACTTTCACCTCA 6011722 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618379803666960