Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20dorsalis_20[refseq_20GCF_5F000789215.1_202014-12-03] 7,166 sequences; 414,984,608 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq7084 91.5 2e-13 >seq7084 Length=1258986 Score = 91.5 bits (100), Expect = 2e-13 Identities = 108/144 (75%), Gaps = 2/144 (1%) Strand=Plus/Plus Query 78190 GTTCGCAAATAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATACTC 78249 || |||||||| |||||||||||||||||||| |||||| ||||| | || ||| Sbjct 1580 GTACGCAAATAATACATGCCCGTCTTGAGACCTGCCTTCCAGCCGTAGAAATGTATAGAA 1639 Query 78250 GACAGCTTGGCCAGACTCGGGTTC-TCCATGAAGATGTTGAGCGACTGGGACTGGTCGAT 78308 | ||||| |||| | | ||| || ||| | ||||||| |||||| ||| ||||| Sbjct 1640 GTAAGCTT-GCCATAGTTGGGCTCAGCCACGTGTATGTTGAACGACTGACTCTGATCGAT 1698 Query 78309 GTACGCACCGCGGTCGGCCGCCAT 78332 | | |||||||| || || ||||| Sbjct 1699 GAATGCACCGCGATCTGCAGCCAT 1722 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548475665891040