Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20dorsalis_20[refseq_20GCF_5F000789215.1_202014-12-03]
7,166 sequences; 414,984,608 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq7164 100 3e-16
>seq7164
Length=6205789
Score = 100 bits (110), Expect = 3e-16
Identities = 184/268 (69%), Gaps = 4/268 (1%)
Strand=Plus/Plus
Query 117305 GTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCAAGACGCGTACCGAATTGT 117364
|||||||| ||||||| ||| ||| ||| || ||||| ||||| |||||||||||
Sbjct 6011519 GTGAAAATATAACGAGCGCTCGCACAATCTTTACCACCCTGCAGACGTGTACCGAATTGA 6011578
Query 117365 CCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGACA 117424
|||| |||||||| | || | || || | ||||| | ||||| ||||| |||||
Sbjct 6011579 CCACGGGGCTCCAATAAATTAATATTATTTGATCCCACGTAATTTTGCGCCAAATTGACT 6011638
Query 117425 ATCGTACCTTGGAGGCTCGCCTCACCATGGTGATACGCCGTCTGCTCCGCCACGTAGCCC 117484
|| ||| | || || | |||||| || || || || | | || ||||| | ||
Sbjct 6011639 ATGGTAGCCTGCAGTGACATCTCACCGTGATGGTAGGCGGACATTTCAGCCACTGAACCA 6011698
Query 117485 GCCAGCTGAGCCACCTTCATGTCTGACGTCAG--GTTCTTCTTGAGGCAGGCATAAATCA 117542
| || || || || |||| || |||| | ||| |||| |||| | | || |
Sbjct 6011699 GACAATTGCGCAACTTTCA--CCTCACGTTTGTCGTTACGTTTGAAACAGGTAAACATAA 6011756
Query 117543 CCTTGCGCTGACTTGGCTTCAGACCATC 117570
| ||||| || | |||||| | ||||||
Sbjct 6011757 CTTTGCGTTGGCCTGGCTTAAAACCATC 6011784
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547166983126800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |