Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20dorsalis_20[refseq_20GCF_5F000789215.1_202014-12-03] 7,166 sequences; 414,984,608 total letters Query= NC_029255.1 Length=129563 Score E Sequences producing significant alignments: (Bits) Value seq7133 96.9 3e-15 >seq7133 Length=2056560 Score = 96.9 bits (106), Expect = 3e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 118474 TCAATGTGATTCATATAGACATGAGCATCCCCAATTGTATGTATGAATTCACCAGGTGTA 118533 ||||| ||||| |||||||||| ||||| || | || || | ||| || || ||| Sbjct 1569232 TCAATATGATTATTATAGACATGTGCATCGCCCAAAGTGTGGACGAAATCCCCTGGTCGG 1569173 Query 118534 AGCCCTGTCAGGTGAGCAATCATGTATGTCAACAAACTGTAGCTGGCTACATTAAAAGGA 118593 || | || | ||||||||||| || || | |||| ||| ||| | |||||| || Sbjct 1569172 AGATCAGTAATATGAGCAATCATATAGGTAAGCAAAGCGTACGAGGCAATATTAAATGGT 1569113 Query 118594 ACACCCAGACCCATGTCTGCTGATCTCTGGTACAATTGGCAAGAGAGCTCCCCGTTTGCA 118653 ||||||| ||||| || || | ||||| ||||| ||||| | ||| || || ||| Sbjct 1569112 ACACCCAATCCCATATCGGCACTGCGTTGGTATAATTGACAAGATAACTCTCCATTGGCA 1569053 Query 118654 ACATAAAACTG 118664 ||| |||| || Sbjct 1569052 ACAAAAAATTG 1569042 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414440601409624