Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20dorsalis_20[refseq_20GCF_5F000789215.1_202014-12-03] 7,166 sequences; 414,984,608 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq7156 122 2e-22 >seq7156 Length=3407544 Score = 122 bits (134), Expect = 2e-22 Identities = 162/225 (72%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | || || | || || || ||||| ||||||||||| || || | | ||| Sbjct 1526513 ACGAAGACGCAGAACCAAATGGAGGGTTGACTCCTTTTGGATGTTGTAGTCGGACAAGGT 1526572 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | |||||||||| || || || |||||||| | || ||||| || || || | || Sbjct 1526573 GCGACCATCTTCCAATTGTTTTCCGGCGAAGATCAAACGCTGTTGATCTGGGGGGATACC 1526632 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 || ||||| ||||| || ||| || ||||||||||||||||| || ||||| | Sbjct 1526633 CTCTTTGTCTTGGATTTTAGCTTTGACATTTTCGATGGTGTCAGAAGGCTCGACCTCTAA 1526692 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 ||||| ||||| || || | || || || || | ||||||||| Sbjct 1526693 GGTGATGGTCTTACCAGTTAAGGTTTTGACGAAAATCTGCATTTT 1526737 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159045573183590