Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20dorsalis_20[refseq_20GCF_5F000789215.1_202014-12-03]
7,166 sequences; 414,984,608 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq7104 167 2e-36
seq3141 152 3e-32
seq7156 136 3e-27
>seq7104
Length=1453772
Score = 167 bits (184), Expect = 2e-36
Identities = 167/214 (78%), Gaps = 2/214 (1%)
Strand=Plus/Plus
Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667
|||||||| || ||||| || ||| | || || || || |||||||| || ||||| |
Sbjct 421934 AAAATGCAAATCTTCGTGAAGACCTTGACTGGCAAGACCATCACTCTGGAGGTTGAACCA 421993
Query 23668 ACGGACACTGTTGAAA-TATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726
| || ||| |||||| | ||||| | || | || ||||||||||| | || |||||
Sbjct 421994 TCCGATACTATTGAAAATGTTAAAGCTAAGA-TTCAAGACAAAGAAGGAATCCCCCCAGA 422052
Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTA 23786
|||||| |||||||| |||||||| |||||||||||||||| ||||||| | ||||||
Sbjct 422053 TCAACAACGTTTAATCTTTGCCGGTAAACAACTGGAAGACGGACGCACTCTGTCCGATTA 422112
Query 23787 CAACATACAAAAAGAGTCCACATTACATTTAGTT 23820
|||||| || || ||||| ||| | ||||| |||
Sbjct 422113 CAACATCCAGAAGGAGTCTACACTTCATTTGGTT 422146
Score = 129 bits (142), Expect = 4e-25
Identities = 167/228 (73%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||||||||| ||||| | ||||||||||| |||||| | || ||||| | |
Sbjct 422165 ATGCAGATTTTCGTCAAAACTTTGACGGGAAAAACCATCACTTTGGAGGTTGAGCCTTCC 422224
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
|| || |||| ||| | ||| | |||||| || || ||||| | || ||||||||
Sbjct 422225 GATACAATTGAGAATGTCAAAGC-TAAAATTCAAGATAAGGAAGGAATCCCCCCAGATCA 422283
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||| ||||| || || || |||||||| |||| || | |||||| | ||| || ||
Sbjct 422284 ACAACGTTTGATTTTCGCTGGCAAACAGTTGGAGGATGGACGCACACTGTCCGACTATAA 422343
Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837
|| || || || ||||| ||||||||||| || | || || || ||
Sbjct 422344 TATTCAGAAGGAATCCACTCTACATTTAGTTCTACGCTTACGTGGTGG 422391
>seq3141
Length=2848
Score = 152 bits (168), Expect = 3e-32
Identities = 162/211 (77%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669
|||||| |||||||| |||||||| ||||| || || |||||||| || ||||| | |
Sbjct 1343 AATGCAAATTTTCGTAAAAACCCTTACGGGTAAGACCATCACTCTTGAGGTTGAGCCTTC 1402
Query 23670 GGACACTGTTGAA-ATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATC 23728
||| ||| ||||| || |||| | |||| || || || ||||| | ||||| ||||
Sbjct 1403 GGATACTATTGAACATGTTAAGTCCAAAA-TTCAAGATAAGGAAGGAATTCCGCCTGATC 1461
Query 23729 AACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACA 23788
|||||||| |||| || ||||| || ||| ||||||| | ||||| || | || || |
Sbjct 1462 AACAGCGTCTAATTTTCGCCGGAAAGCAATTGGAAGATGGTCGCACATTGGCTGACTATA 1521
Query 23789 ACATACAAAAAGAGTCCACATTACATTTAGT 23819
| || || |||||||| ||||| ||||||||
Sbjct 1522 ATATTCAGAAAGAGTCTACATTGCATTTAGT 1552
>seq7156
Length=3407544
Score = 136 bits (150), Expect = 3e-27
Identities = 158/213 (74%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667
||||||||||||||||| |||||| | || || || || ||||| | || || || |
Sbjct 1526737 AAAATGCAGATTTTCGTCAAAACCTTAACTGGTAAGACCATCACCTTAGAGGTCGAGCCT 1526678
Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727
| ||||| | |||| | ||| ||||| |||||||| ||| | || ||||||
Sbjct 1526677 TCTGACACCATCGAAAATGTCAAAGCTAAAATCCAAGACAAAGAGGGTATCCCCCCAGAT 1526618
Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787
||||||||||| || || ||||| |||||| ||||||| | ||||| || ||| |||
Sbjct 1526617 CAACAGCGTTTGATCTTCGCCGGAAAACAATTGGAAGATGGTCGCACCTTGTCCGACTAC 1526558
Query 23788 AACATACAAAAAGAGTCCACATTACATTTAGTT 23820
||||| ||||| ||||| || | ||||| |||
Sbjct 1526557 AACATCCAAAAGGAGTCAACCCTCCATTTGGTT 1526525
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 337980079720328
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |