Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20dorsalis_20[refseq_20GCF_5F000789215.1_202014-12-03] 7,166 sequences; 414,984,608 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq7155 253 2e-62 >seq7155 Length=3116674 Score = 253 bits (280), Expect = 2e-62 Identities = 490/719 (68%), Gaps = 18/719 (3%) Strand=Plus/Plus Query 4371 ACAAGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCA 4430 |||||||| || ||||| |||||||| ||||| | | ||| |||| ||| || || || Sbjct 2758583 ACAAGCAAACGATCAGCCACAAATTCGATATAATCGGACATTAGTTTGCAATTCATACCG 2758642 Query 4431 ATTAATCTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTG 4490 ||||| |||| || | |||| || || || || || || || | || ||||| | Sbjct 2758643 ATTAAATTCACCGGCAAAGCGTCAGTTAAGAATTCCTGCTCAATTTTAACAGCTTCAGAA 2758702 Query 4491 ATTATATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTATCCAAACAATAAACAC 4550 ||||| || || || ||| |||||| | || ||| | | |||| ||||| Sbjct 2758703 ATTATTTCAACAATACGCTCATTACTTGGTTTTTGTATTAAATGTTGGAACATCAAACAT 2758762 Query 4551 GCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCG 4610 || || |||||||| | || || |||| ||| ||||| || ||||| || || || Sbjct 2758763 GCGAAGTCACAATGAAGTCCCTCATCTCGTGAAATTAGTTCATTGGAAAATGTCAAGCCT 2758822 Query 4611 GGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATG 4670 ||||||||||| | || |||||||| || || | ||||| ||| ||||| || Sbjct 2758823 GGCATTAAACCACGTTTCTTAAGCCAGAAGATCGAAGCAAAACTGCCACTGAAGAAGATA 2758882 Query 4671 CCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGTCTTT---- 4726 ||||| ||||| ||||| || | || || || || | ||||| | ||| Sbjct 2758883 CCTTCAACGGCAGCAAATGCAATTACACGTTCACCAAA---GTTGGCT--GACTTCGAGG 2758937 Query 4727 -AATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGT 4785 |||||| | ||||| | || || ||| ||| || ||||| | |||||| | Sbjct 2758938 AAATCCAAGCAAGCGCCCAATCTGCCTTGCGCTTTACGGCAGGCATTGTCTCTATAGCAT 2758997 Query 4786 TAAATAATTTA---CTTT-TTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTA 4841 | ||||| | | |||| |||| | ||| | |||||| || || |||| || |||| Sbjct 2758998 TGAATAAGTAATTCCTTTGTTTCGA----GTCCTTAATATATGTATCAATTAATATGCTA 2759053 Query 4842 TACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCT 4901 |||||||||||||| | ||| || || ||||| |||||||| || ||||| | || ||| Sbjct 2759054 TACATTTCAGAATGCACATTCTCCATCGCAATTTGAAATCCATAGAAGCAACGTGCCTCT 2759113 Query 4902 GTTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTG 4961 || ||||| ||||| | || || | ||| |||| ||||| || || ||||| ||| Sbjct 2759114 GTCACTTGGACTTCCTGGCAGAAACGTTCAACTACATTTTCATTCACAATACCATCAGAT 2759173 Query 4962 GCTGCAAAAAACGCCAAAACATGAGATATAAAGTACTGTTCGTCAGGCTTAAGTTTTTTC 5021 || || ||||| || || || || || ||||| | |||| | | | || | | Sbjct 2759174 GCGGCGAAAAAGGCTAACACGTGTGAAATAAAATGTCGTTCATTATCAGTGAGACGTGCC 2759233 Query 5022 CAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGC 5080 || | || |||||||| | ||| ||||| || || ||||| ||||| ||||| || Sbjct 2759234 CAATCATCCATATCTTTAGAAAGATCTACTTCCTCTACTGTCCAGAACGATGCTTCTGC 2759292 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427012303356278