Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20dorsalis_20[refseq_20GCF_5F000789215.1_202014-12-03]
7,166 sequences; 414,984,608 total letters
Query= NC_030656.1
Length=133492
Score E
Sequences producing significant alignments: (Bits) Value
seq7155 253 2e-62
>seq7155
Length=3116674
Score = 253 bits (280), Expect = 2e-62
Identities = 490/719 (68%), Gaps = 18/719 (3%)
Strand=Plus/Plus
Query 4371 ACAAGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCA 4430
|||||||| || ||||| |||||||| ||||| | | ||| |||| ||| || || ||
Sbjct 2758583 ACAAGCAAACGATCAGCCACAAATTCGATATAATCGGACATTAGTTTGCAATTCATACCG 2758642
Query 4431 ATTAATCTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTG 4490
||||| |||| || | |||| || || || || || || || | || ||||| |
Sbjct 2758643 ATTAAATTCACCGGCAAAGCGTCAGTTAAGAATTCCTGCTCAATTTTAACAGCTTCAGAA 2758702
Query 4491 ATTATATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTATCCAAACAATAAACAC 4550
||||| || || || ||| |||||| | || ||| | | |||| |||||
Sbjct 2758703 ATTATTTCAACAATACGCTCATTACTTGGTTTTTGTATTAAATGTTGGAACATCAAACAT 2758762
Query 4551 GCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCG 4610
|| || |||||||| | || || |||| ||| ||||| || ||||| || || ||
Sbjct 2758763 GCGAAGTCACAATGAAGTCCCTCATCTCGTGAAATTAGTTCATTGGAAAATGTCAAGCCT 2758822
Query 4611 GGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATG 4670
||||||||||| | || |||||||| || || | ||||| ||| ||||| ||
Sbjct 2758823 GGCATTAAACCACGTTTCTTAAGCCAGAAGATCGAAGCAAAACTGCCACTGAAGAAGATA 2758882
Query 4671 CCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGTCTTT---- 4726
||||| ||||| ||||| || | || || || || | ||||| | |||
Sbjct 2758883 CCTTCAACGGCAGCAAATGCAATTACACGTTCACCAAA---GTTGGCT--GACTTCGAGG 2758937
Query 4727 -AATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGT 4785
|||||| | ||||| | || || ||| ||| || ||||| | |||||| |
Sbjct 2758938 AAATCCAAGCAAGCGCCCAATCTGCCTTGCGCTTTACGGCAGGCATTGTCTCTATAGCAT 2758997
Query 4786 TAAATAATTTA---CTTT-TTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTA 4841
| ||||| | | |||| |||| | ||| | |||||| || || |||| || ||||
Sbjct 2758998 TGAATAAGTAATTCCTTTGTTTCGA----GTCCTTAATATATGTATCAATTAATATGCTA 2759053
Query 4842 TACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCT 4901
|||||||||||||| | ||| || || ||||| |||||||| || ||||| | || |||
Sbjct 2759054 TACATTTCAGAATGCACATTCTCCATCGCAATTTGAAATCCATAGAAGCAACGTGCCTCT 2759113
Query 4902 GTTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTG 4961
|| ||||| ||||| | || || | ||| |||| ||||| || || ||||| |||
Sbjct 2759114 GTCACTTGGACTTCCTGGCAGAAACGTTCAACTACATTTTCATTCACAATACCATCAGAT 2759173
Query 4962 GCTGCAAAAAACGCCAAAACATGAGATATAAAGTACTGTTCGTCAGGCTTAAGTTTTTTC 5021
|| || ||||| || || || || || ||||| | |||| | | | || | |
Sbjct 2759174 GCGGCGAAAAAGGCTAACACGTGTGAAATAAAATGTCGTTCATTATCAGTGAGACGTGCC 2759233
Query 5022 CAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGC 5080
|| | || |||||||| | ||| ||||| || || ||||| ||||| ||||| ||
Sbjct 2759234 CAATCATCCATATCTTTAGAAAGATCTACTTCCTCTACTGTCCAGAACGATGCTTCTGC 2759292
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427012303356278
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |