Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20dorsalis_20[refseq_20GCF_5F000789215.1_202014-12-03]
7,166 sequences; 414,984,608 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq7084 300 2e-76
seq7155 253 3e-62
>seq7084
Length=1258986
Score = 300 bits (332), Expect = 2e-76
Identities = 478/681 (70%), Gaps = 5/681 (1%)
Strand=Plus/Plus
Query 76773 TTATCCAATGTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACATACCA 76832
||||||| ||||| || || | | | || ||||| ||||| | ||| ||||| ||
Sbjct 1541 TTATCCACAGTAAATTGTATAGCATTTGCAGCTGGTTTCGTACGCAAATAATACATGCCC 1600
Query 76833 GTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGGA 76892
|| || ||||| |||| ||||||||||| || || || ||| ||| | ||
Sbjct 1601 GTCTTGAGACCTGCCTTCCAGCCGTAGAAATGTATAGAAGTAAGCTTGCCATAGTTGGGC 1660
Query 76893 TCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCC 76952
|| || | || || || | ||||||||| ||||||||||| || || | ||| || |||
Sbjct 1661 TCAGCCACGTGTATGTTGAACGACTGACTCTGATCGATGAATGCACCGCGATCTGCAGCC 1720
Query 76953 ATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCA 77012
||||| || ||| || | ||| ||||||| ||||||| | | | || |
Sbjct 1721 ATTTTAATCGAGGTTTTCACGGAAATCTCCCAAACAGTTTTGTATAGATCGCGTATGTGC 1780
Query 77013 TCTGGAA-GGTTTG--TATTTTGAATGGAACCACCATCTGATATAATTGTATTCTTTATA 77069
| ||| | || || ||| ||| ||||| || | | | |||||| |||| || |||
Sbjct 1781 TGTGGTATGGATTCAATATGTTGTATGGAGCCGCGACTGGTTATAATATTATTTTTCATA 1840
Query 77070 TCATCATTCCACAATTTCCTCTCTGTTAAAACTC-TAAGGAGATGAGGATTAACTATTTG 77128
||||||| |||||| | ||| |||| | | | ||| || ||| |||| || | |||
Sbjct 1841 TCATCATCCCACAAACCCAACTCGGTTAGATCGCGTAACAAG-TGATGATTTACAACTTG 1899
Query 77129 AAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTC 77188
|||||| || || | || | ||| || ||||||||| || || ||||| | || ||
Sbjct 1900 AAATTCACCCGAAAGCACACGACGTGTATAAATATTAGAAGTGTACGGTTCAAATGACTC 1959
Query 77189 ATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTATT 77248
|||||| |||| |||||||||||| |||||||||||||| || || | || ||| ||
Sbjct 1960 ATTGTTGCCCATAATTTGAGCAGTTGAAGCAGTTGGCATGGGCGCAAGCAGCAAAGAGTT 2019
Query 77249 TCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGAAGG 77308
| || ||||||| | ||||| || || | | |||||| ||||||||| | ||
Sbjct 2020 GCGGATACCATGTTGCTTTATTTTCTCCTTCAATTCGGTCCAATTCCAAAGATCAGTTGG 2079
Query 77309 TACAACATCCCAAAGATCGTATTGTAGAATTCCGTTACTAGCATATGATCCATTATATGT 77368
| |||||| | || || |||| ||| || |||||| | ||| || ||||| ||
Sbjct 2080 TGTTTTATCCCACATGTCATACTGTAAAATACCCTTACTAACGGGTGAACCTTTATACGT 2139
Query 77369 TTCATAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCTCCGTAATAAAT 77428
|||||| | || | | ||||||||| ||| ||||| ||||||||||| || || |||||
Sbjct 2140 TTCATAGGTGCCATATTTTTCAGCTAATTCGCAACTGGCTTCCAATGCGCCATAGTAAAT 2199
Query 77429 TGTTTCGAAAATCTTCTTATT 77449
|||||||| || | || |||
Sbjct 2200 AGTTTCGAATATTTGCTGATT 2220
Score = 233 bits (258), Expect = 3e-56
Identities = 578/873 (66%), Gaps = 8/873 (1%)
Strand=Plus/Plus
Query 77733 ATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTA 77792
|| |||||||||| ||||||||| || || ||||| | ||| ||||| || |||||| |
Sbjct 2274 ATTTCGGTACATAAATTACTACACTTAATTGTGCCAACATTCTGTTGATTACTCTTTCGA 2333
Query 77793 TTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAATCTGTGATTCGATAATA 77852
|| || | || ||||| | || | || || ||||| || | || ||||| |||||
Sbjct 2334 TTACAAGCATCTTTATACAACATGTATGGTGTGCCGGTCTCCACTTGCGATTCAATAATG 2393
Query 77853 GATTTCCAGACGACTCTA-GCTTTTATCATAGATTTGTATCGCCTCTCTCTTTCATATTG 77911
||| | |||| | |||||||| | ||| || | || ||||||||
Sbjct 2394 CTAAACCAAA-GACTTTGTGCTTTTATTTTCTTATTGGCACGTCCTTCCTGTTCATATTT 2452
Query 77912 AGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGG 77971
||||| | ||| || || || ||||| || |||| || || || || | | |||
Sbjct 2453 CAGATATAACTTTTCGAACTCTTCACCCCATACTTCATGTAAACCGGGACACTTGTGTGG 2512
Query 77972 GCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCA 78031
||||| | |||||||| |||| | | || ||||||||||| ||||||||||||||
Sbjct 2513 ACACATTAGCGACCAGTCTTCATCGGCTTCTACACGTTTCATAAATAGATCAGGTATCCA 2572
Query 78032 TAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATC 78091
| ||| || | ||||| || | ||| ||||| || || || || || || | |||
Sbjct 2573 CAAGGCATAGAACAAATCTCTGGCACGATGCTCTTCTTTACCAGTGTTTTTCTTCAAATC 2632
Query 78092 GAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCG 78151
| ||| || | |||||||| |||||||||||| || || || || | | || || ||
Sbjct 2633 CAAAAATTCGAAAATATCAGCATGCCATGGTTCGAGGTAGATGGCAAAGGCGCCGGGCCG 2692
Query 78152 TTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAAT 78211
|||| | || ||||| | ||| | || | ||||| | |||| |||||| || |
Sbjct 2693 TTTACCGCACCCTTGATCCACATAGCGTGCTATATTATTGAACACTCGCAACATAGGCAC 2752
Query 78212 AATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACT 78271
| ||| || ||| | | |||||| || | ||| | | || ||||||| || |
Sbjct 2753 CAAACCATTTGATTTGCTATTTGTACCCGCAATTGCAGTGCCTTTTGCGCGTATGCAATG 2812
Query 78272 AATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCA---ACGTTTCAATGT 78328
| | | || || || || || || || || | || || | || ||||
Sbjct 2813 TACGTTCAGACCAATACCGCCAGCAGATTTGGAAATCAATGCACATTGATGTGCAGATGT 2872
Query 78329 ATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTG 78388
| | ||||| || || || |||| |||| | || ||||| || |||| |||
Sbjct 2873 ---GAAAATACCATCAATGGAATCGTCCACCATGGTCAGTAGAAAGCATGATGACAATTG 2929
Query 78389 ATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGA 78448
| || ||| | ||| || | || ||||| ||||| ||||| | ||| ||
Sbjct 2930 CGGCTGCTTAGTGGCAGCAGCGAAAAGCGTTGGAGAAGCATGTGTAAAATAACGTTCGGA 2989
Query 78449 AAGTAGATTGTATGTTTCAATAGCTGATTCTATGTCCCATTGATGAATTCCTACCGCTAC 78508
||| | ||||| ||||| || |||| || ||||| ||| || || | || ||
Sbjct 2990 AAGCAAGTTGTAAGTTTCGATTGCTGCATCGATGTCTTCGCCATGTATACCGATGGCAAC 3049
Query 78509 ACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTATTTATTTTCAACAAGTATGA 78568
|||||| ||||||||||| |||| ||||| | || ||| | || | ||| || ||
Sbjct 3050 ACGCATTAACATATGCTGTGGTCGCTCAACAATTTTGCCATTCAACTTTAGCAAATAGGA 3109
Query 78569 TTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA 78601
||| | ||||||||||||||||| || ||
Sbjct 3110 ACGTTCAAGTGTTTTAAAACCAAAATAATTATA 3142
>seq7155
Length=3116674
Score = 253 bits (280), Expect = 3e-62
Identities = 387/551 (70%), Gaps = 3/551 (1%)
Strand=Plus/Plus
Query 48123 AAATGTTTAAACATTAAACATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAAT 48182
||||||| ||||| |||||||| || ||||||||||| || ||||||| ||||| |
Sbjct 2758742 AAATGTTGGAACATCAAACATGCGAAGTCACAATGAAGTCCCTCATCTCGTGAAATTAGT 2758801
Query 48183 TCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCG 48242
|| || |||||||| | || ||||||| |||||||| || ||||| || || | ||
Sbjct 2758802 TCATTGGAAAATGTCAAGCCTGGCATTAAACCACGTTTCTTAAGCCAGAAGATCGAAGCA 2758861
Query 48243 AAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAA 48302
||| ||| ||||| || ||||| ||||| |||||||| | | | || || |
Sbjct 2758862 AAACTGCCACTGAAGAAGATACCTTCAACGGCAGCAAATGCAATTACACGTTCACCAAAG 2758921
Query 48303 CTGGCTTCGTT---GTGTATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGC 48359
||||| || | ||||| | |||||||| ||||| |||||| ||||
Sbjct 2758922 TTGGCTGACTTCGAGGAAATCCAAGCAAGCGCCCAATCTGCCTTGCGCTTTACGGCAGGC 2758981
Query 48360 ATTGTTTCTATAGCATTAAAGAGAAAGtttttttCATTGCTATCTTTAACGTAAGTATCT 48419
||||| ||||||||||| || | | || ||| || || |||| || |||||
Sbjct 2758982 ATTGTCTCTATAGCATTGAATAAGTAATTCCTTTGTTTCGAGTCCTTAATATATGTATCA 2759041
Query 48420 ATTAAAAGACTATACATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAA 48479
||||| | ||||||||||| || || | ||| || || || || |||||||| || ||
Sbjct 2759042 ATTAATATGCTATACATTTCAGAATGCACATTCTCCATCGCAATTTGAAATCCATAGAAG 2759101
Query 48480 CATCTCGCTTCTGTGATCTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACT 48539
|| | || ||||| | || || ||| || || |||||| | | ||| ||||| ||
Sbjct 2759102 CAACGTGCCTCTGTCACTTGGACTTCCTGGCAGAAACGTTCAACTACATTTTCATTCACA 2759161
Query 48540 ATTCCATCACTAGCAGCAAAAAATGCTAATACATGTTTAATAAAATATTTTTCGTTGGAA 48599
|| |||||| || || ||||| ||||| || ||| |||||||| | ||| || |
Sbjct 2759162 ATACCATCAGATGCGGCGAAAAAGGCTAACACGTGTGAAATAAAATGTCGTTCATTATCA 2759221
Query 48600 GTCAGTTTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAAT 48659
|| || ||| |||| |||||||| || | ||||||||| || ||||||| ||
Sbjct 2759222 GTGAGACGTGCCCAATCATCCATATCTTTAGAAAGATCTACTTCCTCTACTGTCCAGAAC 2759281
Query 48660 GATGCCTCTGC 48670
||||| |||||
Sbjct 2759282 GATGCTTCTGC 2759292
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694606575042240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |