Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20dorsalis_20[refseq_20GCF_5F000789215.1_202014-12-03]
7,166 sequences; 414,984,608 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq7084 291 1e-73
seq7155 260 2e-64
>seq7084
Length=1258986
Score = 291 bits (322), Expect = 1e-73
Identities = 458/651 (70%), Gaps = 5/651 (1%)
Strand=Plus/Plus
Query 75398 GCTGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAA 75457
|||||||| ||||| | ||| ||||| || || || ||||| |||| |||||||||
Sbjct 1571 GCTGGTTTCGTACGCAAATAATACATGCCCGTCTTGAGACCTGCCTTCCAGCCGTAGAAA 1630
Query 75458 TGCATGCTTGTTAGTTTGGAATAACTCGGATCGGCTATATGAATATTCATCGACTGACTT 75517
|| || || || ||| ||| | || || || | || || || | |||||||||
Sbjct 1631 TGTATAGAAGTAAGCTTGCCATAGTTGGGCTCAGCCACGTGTATGTTGAACGACTGACTC 1690
Query 75518 TGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCC 75577
||||||||||| || || | ||| || |||||||| || ||| || | ||| |||
Sbjct 1691 TGATCGATGAATGCACCGCGATCTGCAGCCATTTTAATCGAGGTTTTCACGGAAATCTCC 1750
Query 75578 CAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAA--GATTTG-TATTTTGAATGGAT 75634
|||| ||||||| | | | || | | ||| | |||| ||| ||| |||||
Sbjct 1751 CAAACAGTTTTGTATAGATCGCGTATGTGCTGTGGTATGGATTCAATATGTTGTATGGAG 1810
Query 75635 CCGCCATCAGATATAATTGTATTCTTGATCTCATCATTCCACAATTTTCTCTCGGTTAAA 75694
|||| | | |||||| |||| || || ||||||| |||||| |||||||| |
Sbjct 1811 CCGCGACTGGTTATAATATTATTTTTCATATCATCATCCCACAAACCCAACTCGGTTAGA 1870
Query 75695 ACTC-TAAGGAGATGAGGATTAACAATTTGAAATTCTCCAGACAATACTCTTCGAGTGTA 75753
| | ||| || ||| |||| |||| ||||||||| || || | || | || || ||
Sbjct 1871 TCGCGTAACAAG-TGATGATTTACAACTTGAAATTCACCCGAAAGCACACGACGTGTATA 1929
Query 75754 AATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTTGAAGC 75813
||||||| || || ||||| | || |||||||| |||| ||||||||||||||||||
Sbjct 1930 AATATTAGAAGTGTACGGTTCAAATGACTCATTGTTGCCCATAATTTGAGCAGTTGAAGC 1989
Query 75814 AGTCGGCATAGGTGCCACCAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTT 75873
||| ||||| || || | || ||| || | || ||||||| | ||||| || ||
Sbjct 1990 AGTTGGCATGGGCGCAAGCAGCAAAGAGTTGCGGATACCATGTTGCTTTATTTTCTCCTT 2049
Query 75874 TAGATATTTCCAATCCCAAAGATCTGATGGTACAACATCCCAGAGATCGTATTGTAGAAT 75933
| | |||||| ||||||||| | |||| |||||| | || || |||| |||
Sbjct 2050 CAATTCGGTCCAATTCCAAAGATCAGTTGGTGTTTTATCCCACATGTCATACTGTAAAAT 2109
Query 75934 TCCGTTGCTAGCATATGATCCATTATATGTTTCGTAAGTCCCGTCCTTTTCAGCTAGTTC 75993
|| || ||| | ||| || ||||| ||||| || || || | |||||||||| |||
Sbjct 2110 ACCCTTACTAACGGGTGAACCTTTATACGTTTCATAGGTGCCATATTTTTCAGCTAATTC 2169
Query 75994 GCAACTCGCCTCTAACGCACCGTAATAAATTGTTTCGAAAATCTTCTTATT 76044
|||||| || || || || || || ||||| |||||||| || | || |||
Sbjct 2170 GCAACTGGCTTCCAATGCGCCATAGTAAATAGTTTCGAATATTTGCTGATT 2220
Score = 217 bits (240), Expect = 2e-51
Identities = 580/876 (66%), Gaps = 14/876 (2%)
Strand=Plus/Plus
Query 76328 ATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTTGTTGGTTGCTCTTTTTG 76387
|| || || |||| |||||||||||| || || |||| ||| ||||| || ||||||
Sbjct 2274 ATTTCGGTACATAAATTACTACACTTAATTGTGCCAACATTCTGTTGATTACTCTTTCGA 2333
Query 76388 TTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAATCTGTGATTCGATAATA 76447
||||| | || ||||| | | | || || || || || | || ||||| |||||
Sbjct 2334 TTACAAGCATCTTTATACAACATGTATGGTGTGCCGGTCTCCACTTGCGATTCAATAATG 2393
Query 76448 GATTTCCAGACGACTCTA-GCTTTTATTATAGATTTGTATCGCTTCTCTCT-TTCATATT 76505
||| | |||| | ||||||||| | ||| || | || || ||||||||
Sbjct 2394 CTAAACCAAA-GACTTTGTGCTTTTATTTTCTTATTGGCACG-TCCTTCCTGTTCATATT 2451
Query 76506 GTGTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCG 76565
||||||| ||| || || || ||||| || |||| ||||| ||||| | | |
Sbjct 2452 TCAGATATAACTTTTCGAACTCTTCACCCCATACTTCATGTAAACCGGGACACTTGTGTG 2511
Query 76566 GACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCC 76625
||||||| | ||||| || |||| | | || ||||||||||| |||||||||||||
Sbjct 2512 GACACATTAGCGACCAGTCTTCATCGGCTTCTACACGTTTCATAAATAGATCAGGTATCC 2571
Query 76626 ATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGAT 76685
| | ||| || | ||||| || | | | ||||| || || || || || || | ||
Sbjct 2572 ACAAGGCATAGAACAAATCTCTGGCACGATGCTCTTCTTTACCAGTGTTTTTCTTCAAAT 2631
Query 76686 CTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTC 76745
| | || || | |||||||| |||||||||||| || || || || | | || || |
Sbjct 2632 CCAAAAATTCGAAAATATCAGCATGCCATGGTTCGAGGTAGATGGCAAAGGCGCCGGGCC 2691
Query 76746 GTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAA 76805
||||| | || ||||| | ||| | || | ||||| | |||| |||||| || |
Sbjct 2692 GTTTACCGCACCCTTGATCCACATAGCGTGCTATATTATTGAACACTCGCAACATAGGCA 2751
Query 76806 TAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAAT---AT 76862
| || || ||| | | |||||| || | ||| | | || ||| || || ||
Sbjct 2752 CCAAACCATTTGATTTGCTATTTGTACCCGCAATTGCAGTGCCTTTTGCGCGTATGCAAT 2811
Query 76863 -TACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCG-TTTCAA 76920
||| ||| || || || || || ||| || || | ||||| | | | |
Sbjct 2812 GTACGTTCAGA----CCAATACCGCCAGCAGATTTGGAAATCAATGCACATTGATGTGCA 2867
Query 76921 TGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGACAT 76980
||| | | || || || || ||| |||| |||| | || ||||| || ||||
Sbjct 2868 GATGTGA-AAATACCATCAATGGAATCGTCCACCATGGTCAGTAGAAAGCATGATGACAA 2926
Query 76981 TTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTC 77040
||| | || ||| | ||| || | || ||||| ||||| || || | |||
Sbjct 2927 TTGCGGCTGCTTAGTGGCAGCAGCGAAAAGCGTTGGAGAAGCATGTGTAAAATAACGTTC 2986
Query 77041 AGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGC 77100
||||| | ||||| ||||| || |||| || || || ||| || || | ||
Sbjct 2987 GGAAAGCAAGTTGTAAGTTTCGATTGCTGCATCGATGTCTTCGCCATGTATACCGATGGC 3046
Query 77101 GACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTA 77160
|||||||| ||||||||||| ||||| || ||| | || ||| | || | ||| ||
Sbjct 3047 AACACGCATTAACATATGCTGTGGTCGCTCAACAATTTTGCCATTCAACTTTAGCAAATA 3106
Query 77161 TGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA 77196
|| ||| | ||||||||||||||||| || ||
Sbjct 3107 GGAACGTTCAAGTGTTTTAAAACCAAAATAATTATA 3142
>seq7155
Length=3116674
Score = 260 bits (288), Expect = 2e-64
Identities = 481/701 (69%), Gaps = 7/701 (1%)
Strand=Plus/Plus
Query 46464 ATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATTCATTCCTATGAGTTTGAC 46523
||| || || ||||| ||||| ||| | || |||||||| || || | || ||
Sbjct 2758594 ATCAGCCACAAATTCGATATAATCGGACATTAGTTTGCAATTCATACCGATTAAATTCAC 2758653
Query 46524 CGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGACAGCATCCGATATTAT--CGAT 46581
||| | ||| || || | || || || ||||| | ||||| || || ||||| | |
Sbjct 2758654 CGGCAAAGCGTCAGTTAAGAATTCCTGCTCAATTTTAACAGCTTCAGAAATTATTTCAAC 2758713
Query 46582 GTTACTGTTTCCTCACTTGGTGGATGCATCAAATGTTTAAACATTAAACATGCAAAATCA 46641
||| | | | ||||||| || || ||||||| ||||| |||||||| || |||
Sbjct 2758714 AATACGCT--CATTACTTGGTTTTTGTATTAAATGTTGGAACATCAAACATGCGAAGTCA 2758771
Query 46642 CAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTAGT 46701
|||||||| || ||||||| ||||| ||| || |||||||| | || |||||||
Sbjct 2758772 CAATGAAGTCCCTCATCTCGTGAAATTAGTTCATTGGAAAATGTCAAGCCTGGCATTAAA 2758831
Query 46702 CCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACA 46761
||||| || || ||||| || || | || ||| ||| ||||| || ||||| ||
Sbjct 2758832 CCACGTTTCTTAAGCCAGAAGATCGAAGCAAAACTGCCACTGAAGAAGATACCTTCAACG 2758891
Query 46762 GCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATT--ATGAA-TCCACCTTTGA 46818
|| || ||||| | | | || || | |||| || | ||| |||| |
Sbjct 2758892 GCAGCAAATGCAATTACACGTTCACCAAAGTTGGCTGACTTCGAGGAAATCCAAGCAAGC 2758951
Query 46819 GCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAAGttt 46878
|||||||| ||||| |||||| ||||||||| ||||||||||| || | | ||
Sbjct 2758952 GCCCAATCTGCCTTGCGCTTTACGGCAGGCATTGTCTCTATAGCATTGAATAAGTAATTC 2759011
Query 46879 ttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTATACATTTCTGAATGAATG 46938
||| | || |||| ||||||||| ||||| | ||||||||||| ||||| |
Sbjct 2759012 CTTTGTTTCGAGTCCTTAATATATGTATCAATTAATATGCTATACATTTCAGAATGCACA 2759071
Query 46939 TTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACCTCTGTA 46998
|| || || || || |||||||| || || || | ||| || || | || || ||
Sbjct 2759072 TTCTCCATCGCAATTTGAAATCCATAGAAGCAACGTGCCTCTGTCACTTGGACTTCCTGG 2759131
Query 46999 CAAAATCGTTCAGACAAATTCTCATTCACTATTCCATCACTAGCAGCAAAAAATGCCAAT 47058
|| || |||||| | ||| |||||||| || |||||| || || ||||| || ||
Sbjct 2759132 CAGAAACGTTCAACTACATTTTCATTCACAATACCATCAGATGCGGCGAAAAAGGCTAAC 2759191
Query 47059 ACATGTTTAATAAAATATTTTTCATCGGTAGTCAGTTTATTCCAGTCATTGATATCTTTT 47118
|| ||| |||||||| | ||||| ||| || ||| |||| ||||||||
Sbjct 2759192 ACGTGTGAAATAAAATGTCGTTCATTATCAGTGAGACGTGCCCAATCATCCATATCTTTA 2759251
Query 47119 GATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGC 47159
|| | ||||||||| || |||||||||| || || |||||
Sbjct 2759252 GAAAGATCTACTTCCTCTACTGTCCAGAACGATGCTTCTGC 2759292
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 712870538901120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |