Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20dorsalis_20[refseq_20GCF_5F000789215.1_202014-12-03] 7,166 sequences; 414,984,608 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq7155 248 9e-61 >seq7155 Length=3116674 Score = 248 bits (274), Expect = 9e-61 Identities = 475/692 (69%), Gaps = 10/692 (1%) Strand=Plus/Plus Query 23343 ATCTGCTACAAATTCAATATATTGACACATCAAATCATAGTTTATACCTATTAGTTTTAC 23402 ||| || |||||||| ||||| | |||| | | | || ||||| |||| || || Sbjct 2758594 ATCAGCCACAAATTCGATATAATCGGACATTAGTTTGCAATTCATACCGATTAAATTCAC 2758653 Query 23403 TGGAATCGCATCATATAAGAATAGTTTTTCAATGGAAACAGCATCTTTAATTATTTGAAC 23462 || | || ||| ||||||| | ||||| |||||| || |||||||| ||| Sbjct 2758654 CGGCAAAGCGTCAGTTAAGAATTCCTGCTCAATTTTAACAGCTTCAGAAATTATTTCAAC 2758713 Query 23463 AATAACTTCTTCACTAGGTGGATATTTTAAATACTTAAACAATAAACATGCAAAATCACA 23522 |||| || | ||| ||| | | |||||| | |||| |||||||| || ||||| Sbjct 2758714 AATACGCTCATTACTTGGTTTTTGTATTAAATGTTGGAACATCAAACATGCGAAGTCACA 2758773 Query 23523 ATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCC 23582 ||| || || ||||| | ||| | |||||| |||||||| || ||||||||||| || Sbjct 2758774 ATGAAGTCCCTCATCTCGTGAAATTAGTTCATTGGAAAATGTCAAGCCTGGCATTAAACC 2758833 Query 23583 TCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGC 23642 ||||| |||| ||| || || | |||||| || ||||| ||||| ||||| || Sbjct 2758834 ACGTTTCTTAAGCCAGAAGATCGAAGCAAAACTGCCACTGAAGAAGATACCTTCAACGGC 2758893 Query 23643 CGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTA-TAATCAGAAATCCAtttttttG 23701 ||||| || | | |||| |||||| |||| | | | |||||||| | Sbjct 2758894 AGCAAATGCAATTACACGTTCACCAAA-GTTGGCTGACTTCGAGGAAATCCAAGCAAGCG 2758952 Query 23702 TCCAATTAGCCTTCAATTTTAC-ACACTCAATTGTTTCAATTGCTTTTAAGAGAAAAGTT 23760 ||||| ||||| ||||| || | ||||| || || || || || | || | Sbjct 2758953 CCCAATCTGCCTTGCGCTTTACGGCAGGC-ATTGTCTCTATAGCATTGAATAAGTAATTC 2759011 Query 23761 TTTTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATA 23820 ||| || || | |||||||||||||||| || ||||||||||||||||| | | Sbjct 2759012 CTTTGTTTCGAGTCCTTAATATATGTATCAATTAATATGCTATACATTTCAGAATGCACA 2759071 Query 23821 TTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGACAATTGAACATCATTA 23880 || || || ||||| ||||| ||||| || || | || || | || ||| || || | Sbjct 2759072 TTCTCCATCGCAATTTGAAATCCATAGAAGCAACGTGCCTCTGTCACTTGGACTTCCTGG 2759131 Query 23881 AAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGA 23940 | || | || | ||| |||||| || |||||||||||| || || || || || | Sbjct 2759132 CAGAAACGTTCAACTACATTTTCATTCACAATACCATCAGATGCGGCGAAAAAGGCTAAC 2759191 Query 23941 ACATATTTTATAAAATGTCTTTC---ATCAGTTGATAATTTTTTCCAATCATTAATATCT 23997 || | | |||||||||| ||| ||||| ||| | | |||||||| |||||| Sbjct 2759192 ACGTGTGAAATAAAATGTCGTTCATTATCAG-TGAGA--CGTGCCCAATCATCCATATCT 2759248 Query 23998 TTTGATAAATCAACTTCATCAACTGTCCAAAA 24029 || || | ||| ||||| || |||||||| || Sbjct 2759249 TTAGAAAGATCTACTTCCTCTACTGTCCAGAA 2759280 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521441287712400