Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20dorsalis_20[refseq_20GCF_5F000789215.1_202014-12-03]
7,166 sequences; 414,984,608 total letters
Query= NC_032111.1
Length=163005
Score E
Sequences producing significant alignments: (Bits) Value
seq7155 248 9e-61
>seq7155
Length=3116674
Score = 248 bits (274), Expect = 9e-61
Identities = 475/692 (69%), Gaps = 10/692 (1%)
Strand=Plus/Plus
Query 23343 ATCTGCTACAAATTCAATATATTGACACATCAAATCATAGTTTATACCTATTAGTTTTAC 23402
||| || |||||||| ||||| | |||| | | | || ||||| |||| || ||
Sbjct 2758594 ATCAGCCACAAATTCGATATAATCGGACATTAGTTTGCAATTCATACCGATTAAATTCAC 2758653
Query 23403 TGGAATCGCATCATATAAGAATAGTTTTTCAATGGAAACAGCATCTTTAATTATTTGAAC 23462
|| | || ||| ||||||| | ||||| |||||| || |||||||| |||
Sbjct 2758654 CGGCAAAGCGTCAGTTAAGAATTCCTGCTCAATTTTAACAGCTTCAGAAATTATTTCAAC 2758713
Query 23463 AATAACTTCTTCACTAGGTGGATATTTTAAATACTTAAACAATAAACATGCAAAATCACA 23522
|||| || | ||| ||| | | |||||| | |||| |||||||| || |||||
Sbjct 2758714 AATACGCTCATTACTTGGTTTTTGTATTAAATGTTGGAACATCAAACATGCGAAGTCACA 2758773
Query 23523 ATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCC 23582
||| || || ||||| | ||| | |||||| |||||||| || ||||||||||| ||
Sbjct 2758774 ATGAAGTCCCTCATCTCGTGAAATTAGTTCATTGGAAAATGTCAAGCCTGGCATTAAACC 2758833
Query 23583 TCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGC 23642
||||| |||| ||| || || | |||||| || ||||| ||||| ||||| ||
Sbjct 2758834 ACGTTTCTTAAGCCAGAAGATCGAAGCAAAACTGCCACTGAAGAAGATACCTTCAACGGC 2758893
Query 23643 CGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTA-TAATCAGAAATCCAtttttttG 23701
||||| || | | |||| |||||| |||| | | | |||||||| |
Sbjct 2758894 AGCAAATGCAATTACACGTTCACCAAA-GTTGGCTGACTTCGAGGAAATCCAAGCAAGCG 2758952
Query 23702 TCCAATTAGCCTTCAATTTTAC-ACACTCAATTGTTTCAATTGCTTTTAAGAGAAAAGTT 23760
||||| ||||| ||||| || | ||||| || || || || || | || |
Sbjct 2758953 CCCAATCTGCCTTGCGCTTTACGGCAGGC-ATTGTCTCTATAGCATTGAATAAGTAATTC 2759011
Query 23761 TTTTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATA 23820
||| || || | |||||||||||||||| || ||||||||||||||||| | |
Sbjct 2759012 CTTTGTTTCGAGTCCTTAATATATGTATCAATTAATATGCTATACATTTCAGAATGCACA 2759071
Query 23821 TTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGACAATTGAACATCATTA 23880
|| || || ||||| ||||| ||||| || || | || || | || ||| || || |
Sbjct 2759072 TTCTCCATCGCAATTTGAAATCCATAGAAGCAACGTGCCTCTGTCACTTGGACTTCCTGG 2759131
Query 23881 AAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGA 23940
| || | || | ||| |||||| || |||||||||||| || || || || || |
Sbjct 2759132 CAGAAACGTTCAACTACATTTTCATTCACAATACCATCAGATGCGGCGAAAAAGGCTAAC 2759191
Query 23941 ACATATTTTATAAAATGTCTTTC---ATCAGTTGATAATTTTTTCCAATCATTAATATCT 23997
|| | | |||||||||| ||| ||||| ||| | | |||||||| ||||||
Sbjct 2759192 ACGTGTGAAATAAAATGTCGTTCATTATCAG-TGAGA--CGTGCCCAATCATCCATATCT 2759248
Query 23998 TTTGATAAATCAACTTCATCAACTGTCCAAAA 24029
|| || | ||| ||||| || |||||||| ||
Sbjct 2759249 TTAGAAAGATCTACTTCCTCTACTGTCCAGAA 2759280
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 521441287712400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |