Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20dorsalis_20[refseq_20GCF_5F000789215.1_202014-12-03] 7,166 sequences; 414,984,608 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq7104 145 2e-29 seq7156 136 1e-26 seq3141 102 2e-16 >seq7104 Length=1453772 Score = 145 bits (160), Expect = 2e-29 Identities = 162/216 (75%), Gaps = 3/216 (1%) Strand=Plus/Plus Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974 ||||||| |||| |||||||| || | || || || || ||||| || ||||| ||| Sbjct 421934 AAAATGC---AAATCTTCGTGAAGACCTTGACTGGCAAGACCATCACTCTGGAGGTTGAA 421990 Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCG 178034 || || || || || || || ||| |||||||| ||||||||||||||||| || Sbjct 421991 CCATCCGATACTATTGAAAATGTTAAAGCTAAGATTCAAGACAAAGAAGGAATCCCCCCA 422050 Query 178035 GACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGAT 178094 || || ||||| | ||||| ||||| ||||| || ||||| ||| | ||||| ||||| Sbjct 422051 GATCAACAACGTTTAATCTTTGCCGGTAAACAACTGGAAGACGGACGCACTCTGTCCGAT 422110 Query 178095 TATAACGTCCAAAAAGAATCAACACTGCATCTTGTT 178130 || ||| |||| || || || ||||| ||| | ||| Sbjct 422111 TACAACATCCAGAAGGAGTCTACACTTCATTTGGTT 422146 Score = 125 bits (138), Expect = 2e-23 Identities = 152/207 (73%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| |||||| | || |||||||| ||||| | ||||| || || || Sbjct 422168 CAGATTTTCGTCAAAACTTTGACGGGAAAAACCATCACTTTGGAGGTTGAGCCTTCCGAT 422227 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || ||||| |||||| || ||||| || || ||||||||||| || || || ||| Sbjct 422228 ACAATTGAGAATGTCAAAGCTAAAATTCAAGATAAGGAAGGAATCCCCCCAGATCAACAA 422287 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | || ||||| || |||||| | || |||||| | || || |||| ||||| | Sbjct 422288 CGTTTGATTTTCGCTGGCAAACAGTTGGAGGATGGACGCACACTGTCCGACTATAATATT 422347 Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130 || || ||||| || || ||| | ||| Sbjct 422348 CAGAAGGAATCCACTCTACATTTAGTT 422374 >seq7156 Length=3407544 Score = 136 bits (150), Expect = 1e-26 Identities = 164/220 (75%), Gaps = 5/220 (2%) Strand=Plus/Minus Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974 ||||||| | |||||||| ||||| | || || || || |||||| | ||||| || Sbjct 1526737 AAAATGC---AGATTTTCGTCAAAACCTTAACTGGTAAGACCATCACCTTAGAGGTCGAG 1526681 Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCG 178034 || ||||||||||| || |||||| || || || |||||||| || ||||| || Sbjct 1526680 CCTTCTGACACCATCGAAAATGTCAAAGCTAAAATCCAAGACAAAGAGGGTATCCCCCCA 1526621 Query 178035 GACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGA 178093 || || || || | ||||||||||||||||| | |||||||| | || |||| |||| Sbjct 1526620 GATCAACAGCGTTTGATCTTCGCCGGAAAACAATTGGAAGATGGTCGCAC-CTTGTCCGA 1526562 Query 178094 TTATAACGTCCAAAAAGAATCAACACTGCATCTTGTTTTG 178133 || ||| ||||||| || ||||| || ||| | ||| || Sbjct 1526561 CTACAACATCCAAAAGGAGTCAACCCTCCATTTGGTTCTG 1526522 >seq3141 Length=2848 Score = 102 bits (112), Expect = 2e-16 Identities = 143/201 (71%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||||||||| ||||| || || || || || ||||| || ||||| || || || Sbjct 1347 CAAATTTTCGTAAAAACCCTTACGGGTAAGACCATCACTCTTGAGGTTGAGCCTTCGGAT 1406 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || | || || || ||||| || || |||||||| || || || || || Sbjct 1407 ACTATTGAACATGTTAAGTCCAAAATTCAAGATAAGGAAGGAATTCCGCCTGATCAACAG 1466 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || || ||||||||||| || | |||||||| | || | || || ||||| | Sbjct 1467 CGTCTAATTTTCGCCGGAAAGCAATTGGAAGATGGTCGCACATTGGCTGACTATAATATT 1526 Query 178104 CAAAAAGAATCAACACTGCAT 178124 || ||||| || ||| ||||| Sbjct 1527 CAGAAAGAGTCTACATTGCAT 1547 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203620680172204