Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20dorsalis_20[refseq_20GCF_5F000789215.1_202014-12-03]
7,166 sequences; 414,984,608 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq7104 145 2e-29
seq7156 136 1e-26
seq3141 102 2e-16
>seq7104
Length=1453772
Score = 145 bits (160), Expect = 2e-29
Identities = 162/216 (75%), Gaps = 3/216 (1%)
Strand=Plus/Plus
Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974
||||||| |||| |||||||| || | || || || || ||||| || ||||| |||
Sbjct 421934 AAAATGC---AAATCTTCGTGAAGACCTTGACTGGCAAGACCATCACTCTGGAGGTTGAA 421990
Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCG 178034
|| || || || || || || ||| |||||||| ||||||||||||||||| ||
Sbjct 421991 CCATCCGATACTATTGAAAATGTTAAAGCTAAGATTCAAGACAAAGAAGGAATCCCCCCA 422050
Query 178035 GACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGAT 178094
|| || ||||| | ||||| ||||| ||||| || ||||| ||| | ||||| |||||
Sbjct 422051 GATCAACAACGTTTAATCTTTGCCGGTAAACAACTGGAAGACGGACGCACTCTGTCCGAT 422110
Query 178095 TATAACGTCCAAAAAGAATCAACACTGCATCTTGTT 178130
|| ||| |||| || || || ||||| ||| | |||
Sbjct 422111 TACAACATCCAGAAGGAGTCTACACTTCATTTGGTT 422146
Score = 125 bits (138), Expect = 2e-23
Identities = 152/207 (73%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| |||||||| |||||| | || |||||||| ||||| | ||||| || || ||
Sbjct 422168 CAGATTTTCGTCAAAACTTTGACGGGAAAAACCATCACTTTGGAGGTTGAGCCTTCCGAT 422227
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || ||||| |||||| || ||||| || || ||||||||||| || || || |||
Sbjct 422228 ACAATTGAGAATGTCAAAGCTAAAATTCAAGATAAGGAAGGAATCCCCCCAGATCAACAA 422287
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | || ||||| || |||||| | || |||||| | || || |||| ||||| |
Sbjct 422288 CGTTTGATTTTCGCTGGCAAACAGTTGGAGGATGGACGCACACTGTCCGACTATAATATT 422347
Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130
|| || ||||| || || ||| | |||
Sbjct 422348 CAGAAGGAATCCACTCTACATTTAGTT 422374
>seq7156
Length=3407544
Score = 136 bits (150), Expect = 1e-26
Identities = 164/220 (75%), Gaps = 5/220 (2%)
Strand=Plus/Minus
Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974
||||||| | |||||||| ||||| | || || || || |||||| | ||||| ||
Sbjct 1526737 AAAATGC---AGATTTTCGTCAAAACCTTAACTGGTAAGACCATCACCTTAGAGGTCGAG 1526681
Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCG 178034
|| ||||||||||| || |||||| || || || |||||||| || ||||| ||
Sbjct 1526680 CCTTCTGACACCATCGAAAATGTCAAAGCTAAAATCCAAGACAAAGAGGGTATCCCCCCA 1526621
Query 178035 GACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGA 178093
|| || || || | ||||||||||||||||| | |||||||| | || |||| ||||
Sbjct 1526620 GATCAACAGCGTTTGATCTTCGCCGGAAAACAATTGGAAGATGGTCGCAC-CTTGTCCGA 1526562
Query 178094 TTATAACGTCCAAAAAGAATCAACACTGCATCTTGTTTTG 178133
|| ||| ||||||| || ||||| || ||| | ||| ||
Sbjct 1526561 CTACAACATCCAAAAGGAGTCAACCCTCCATTTGGTTCTG 1526522
>seq3141
Length=2848
Score = 102 bits (112), Expect = 2e-16
Identities = 143/201 (71%), Gaps = 0/201 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||||||||| ||||| || || || || || ||||| || ||||| || || ||
Sbjct 1347 CAAATTTTCGTAAAAACCCTTACGGGTAAGACCATCACTCTTGAGGTTGAGCCTTCGGAT 1406
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || | || || || ||||| || || |||||||| || || || || ||
Sbjct 1407 ACTATTGAACATGTTAAGTCCAAAATTCAAGATAAGGAAGGAATTCCGCCTGATCAACAG 1466
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || || ||||||||||| || | |||||||| | || | || || ||||| |
Sbjct 1467 CGTCTAATTTTCGCCGGAAAGCAATTGGAAGATGGTCGCACATTGGCTGACTATAATATT 1526
Query 178104 CAAAAAGAATCAACACTGCAT 178124
|| ||||| || ||| |||||
Sbjct 1527 CAGAAAGAGTCTACATTGCAT 1547
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203620680172204
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |