Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25] 3,306 sequences; 462,505,359 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq2718 197 1e-45 seq2707 84.2 2e-11 >seq2718 Length=1670031 Score = 197 bits (218), Expect = 1e-45 Identities = 461/693 (67%), Gaps = 12/693 (2%) Strand=Plus/Minus Query 16036 ATCTGCTACAAATTCTATATATTGACACATTAAGTCGCAATTAATTCCTATAAGTCGTAC 16095 ||| || |||||||| ||||| | |||||| | |||||| || || || || || Sbjct 71488 ATCAGCCACAAATTCGATATAATCGGACATTAGTTTGCAATTCATACCGATTAGATTCAC 71429 Query 16096 CGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACCGCTTCTTTAATGATATCGGT 16155 ||| | ||| | ||||| |||| || || || ||| ||||| ||| || || Sbjct 71428 CGGCAAAGCGTCAGTTAAGAATTCCTGCTCAATTTTAACAGCTTCAGAAATTATTTCAAC 71369 Query 16156 GGCTCGTGTTTCAGACGGTGTATGGTTTAGGTGTTTAAACATTAGACACGCGAAGTCGCA 16215 || | | ||| | || ||| |||| ||||| | ||| |||||||| || Sbjct 71368 AATACGCTCATTACTTGGTTTTTGTATTAAATGTTGGAACATCAAACATGCGAAGTCACA 71309 Query 16216 ATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGCATTTTTCC 16275 ||| ||||| || |||| || ||||| |||||||| || || ||||||||| || Sbjct 71308 ATGAAGTCCCTCATCTCGTGAAATTAGTTCATTGGAAAATGTCAAGCCTGGCATTAAACC 71249 Query 16276 TCGTTTCTTTAACCAGAATATCGCAGCAAA--TGACCCCGAAAAGAATATACCCTCAACA 16333 |||||||| | |||||| |||| |||||| || | | ||| ||| ||||| ||||| Sbjct 71248 ACGTTTCTTAAGCCAGAAGATCGAAGCAAAACTGCCACTGAA--GAAAATACCTTCAACG 71191 Query 16334 GATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATTACGAATCCATTTCTGT 16393 | ||||| || |||| ||||| | | | || || | |||||| | Sbjct 71190 GCAGCAAATGCAATTACACGTTCACCAAAGTTGGCCGACTTCGAAGAAATCCAAGCAAGC 71131 Query 16394 ACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGCCTTAAA----CAATTT 16449 |||| || || || | |||| | ||| || ||||| || || || ||||| Sbjct 71130 GCCCAATCTGCCTTACGCTTTACGGCAGGCATTGTCTCTATAGCATTGAATAAGCAATTC 71071 Query 16450 CTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACTGTACATTTCTGAGTG 16509 || | |||| | || | ||||| |||||||| | || || |||||||| || || Sbjct 71070 CTTTGTTTCGAG----TCCTTAATATATGTATCAATTAATATGCTATACATTTCAGAATG 71015 Query 16510 TATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGCTATTTGTACTTC 16569 | ||||| || || || ||||||||||||||||| || ||||| | | ||| ||||| Sbjct 71014 CACATTCTCCATCGCAATTTGAAATCCATAGAAGCAACGTGCCTCTGTCACTTGGACTTC 70955 Query 16570 CACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACTTGCAGCAAAAAACGC 16629 | | | || ||||| | | || |||||||| ||||| ||| ||| || ||||| || Sbjct 70954 CTGGCAGAAGCGTTCAACTACATTTTCATTCACAATACCATCAGATGCGGCGAAAAAGGC 70895 Query 16630 CAATATGTGCTTAATGAAATATTTTTCGTCAGATGTAAGAATATGCCAATCTTTTAAATC 16689 || | ||| ||| |||| | ||| | | || || |||||| | | ||| Sbjct 70894 TAACACGTGGGAAATAAAATGTCGTTCATTATCAGTGAGGCGTGCCCAATCATCCATATC 70835 Query 16690 TTTGGATATATCCACTTCTTCTGGCGTCCAAAA 16722 ||| || | ||| ||||| ||| ||||| || Sbjct 70834 TTTAGAAAGATCTACTTCCTCTACTGTCCAGAA 70802 >seq2707 Length=1765650 Score = 84.2 bits (92), Expect = 2e-11 Identities = 142/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 119014 CCCACGTATCCGTTGGGATCTGTTCCGTCTAACTCGTACTTATCGTTTAAGTAGATACAG 119073 ||||| || ||||||| |||| | || ||||| || || |||||||| || || Sbjct 1307280 CCCACATAACCGTTGGAATCTCTGCCATCTAAACTATATTTGTCGTTTAAATAAATTGCA 1307221 Query 119074 ACGCTTAACGCACTTTCCGGAGTCTTACTCCATTCCAGTAtttttttAGCCCAGTACATA 119133 | || ||| ||| || | || |||||||||||| ||||||||||| ||| || Sbjct 1307220 ATTTCTAGCGCCTCTTCTGGTGAGTTGGACCATTCCAGTATCTTTTTAGCCCAATACTTA 1307161 Query 119134 CGTAAATACCCGTGCATTTTACCCTCGTTAATCATCTGAAGTTGTGCGGTGTTCCATAGA 119193 || | | | ||||||||||| || || || || || | ||| || | ||||| || Sbjct 1307160 CGAAGAAATCCGTGCATTTTGCCTTCACGAACCAGTTGTATTTGAGCAGCATTCCAGAGG 1307101 Query 119194 GGATCGTGTGTACGGGCGTGTTCTAA 119219 ||| |||||| || ||||| || Sbjct 1307100 TCATCATGTGTATTTGCTTGTTCGAA 1307075 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511393265799920