Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25]
3,306 sequences; 462,505,359 total letters
Query= NC_001350.1
Length=112930
Score E
Sequences producing significant alignments: (Bits) Value
seq314 156 3e-33
>seq314
Length=932230
Score = 156 bits (172), Expect = 3e-33
Identities = 412/624 (66%), Gaps = 4/624 (1%)
Strand=Plus/Plus
Query 101643 TTGGAAACGGTCTAGGAGTTCGCGTCAACTGCATTTTAAGAGCATCAATGTGATCTACAT 101702
||||||||| | ||| |||||| ||||| ||| | || ||||| |||| ||
Sbjct 384027 TTGGAAACGCCCGAGGTTCTCGCGTTAACTGTTCTTTTAATGCTTCAATATGATTATTAT 384086
Query 101703 AGATGTGAGCATCTCCTATAGTATGGATAAACTCTCCAGGCACTAGATTAGTGACATGAG 101762
||| || ||||| || | ||| |||| || || || || |||| ||| | |||||
Sbjct 384087 AGACATGTGCATCGCCCAAAGTGTGGACGAAATCCCCTGGTCGGAGATCAGTAATATGAG 384146
Query 101763 CAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAACCCCATAT 101822
||||||| | || | | || || ||||| |||||||| || || || |||||||
Sbjct 384147 CAATCATATAGGTAAGCAAAGCGTACGAGGCAATATTAAATGGTACACCCAATCCCATAT 384206
Query 101823 CAGCTGATCTTTGATACAGTTGACAGGAAAGCTTTCCATCACAGACATAAAATTGACTTA 101882
| || | ||| || | |||||| || | || ||||| ||| ||||||| |
Sbjct 384207 CGGCACTGCGTTGGTATAATTGACAAGATAACTCTCCATTGGCAACAAAAAATTG-TGCA 384265
Query 101883 ATAC-ATGACAAGGCGGCAACACCATTTTAGGAATGTCTGAAACATTCCAAGCACACATT 101941
| || ||||||||| || | | |||||| ||| || || | |||||||||| |||||
Sbjct 384266 AGACAATGACAAGGTGGTAGCGCCATTTGAGGGATATCGACAGGATTCCAAGCAGACATT 384325
Query 101942 AACATCCTTCTATCTGTAGGGTTTGTTTTTATAGTATCAATCAACTGTTTTAATTGGTCA 102001
| || | || ||| | || || || | ||||| ||||| | || | | ||| ||
Sbjct 384326 ATAATACGTCGATCATTTGGATTATTTCTGATAGTGTCAATTACTTGCTGAAGTTGATCT 384385
Query 102002 ACTCCTTCTCCTTTATAATCGCGCCCAACACCTT-TATATTCTGCTCCGAAATGCCTCCA 102060
| || || |||| ||| | || || || | || | || || ||||| | |||
Sbjct 384386 ATACCCTCATCTTTGTAA-CTGTCCTTGCAGTTTCTGTACTTGGCCCCAAAATGACGCCA 384444
Query 102061 CTGAAATCCATACACAGGTCCAAGATCTCCTTCATCTCTGTCATAAAAACCAAGTTTATC 102120
|||||| ||||| || || || ||||| ||||| || || ||| |||| || ||| ||
Sbjct 384445 CTGAAAACCATAAACTGGGCCTAGATCACCTTCCTCCCTATCAGAAAACCCGCATTTGTC 384504
Query 102121 TAAAAATGATCTAGATCCATTCGCATCCCAAATGTGCACGCCAGCTGCTGATAGCTCTTT 102180
||| || ||| | || | ||||| ||||| | | || || |||
Sbjct 384505 TAAGAACTCCCTATTACTGTTTCCGTCCCATATGTGAATATTTTTTTCTTGAAGTATTTT 384564
Query 102181 GCTGTCAGTAGATCCTCTGATAAACCACAACAGTTCTTCAACAACACCTCTCCAAAATAC 102240
||| || || | |||||| | || |||||| | ||| | | |||||||||
Sbjct 384565 AGCGTCTGTTTTACCATGAACAAACCATAGCAATTCTTCGGCGACAGCACGCCAAAATAC 384624
Query 102241 TCTCTTAGTAGTTAAAAGTGGAAA 102264
|| ||| ||||||| | ||||||
Sbjct 384625 TCGCTTTGTAGTTAGTAATGGAAA 384648
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 361236644511806
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |