Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25] 3,306 sequences; 462,505,359 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq636 116 4e-21 seq1581 98.7 1e-15 seq2674 96.9 4e-15 seq958 96.9 4e-15 seq115 96.9 4e-15 seq880 95.1 1e-14 seq425 93.3 5e-14 >seq636 Length=779586 Score = 116 bits (128), Expect = 4e-21 Identities = 76/84 (90%), Gaps = 0/84 (0%) Strand=Plus/Minus Query 60054 ATGAAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACA 60113 || ||||| ||||||| |||| ||||||||||||| ||||||||||||||||||||| | Sbjct 438978 ATCAAAAAATTTCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGA 438919 Query 60114 TACTCACCACTATACTACCGAGGA 60137 |||| ||||||||||||||||||| Sbjct 438918 TACTGACCACTATACTACCGAGGA 438895 Score = 104 bits (114), Expect = 3e-17 Identities = 73/82 (89%), Gaps = 1/82 (1%) Strand=Plus/Plus Query 60057 AAAAATTTTC-TCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATA 60115 ||||||| | ||| |||| ||||||||||||| ||||||||||||||||||||| ||| Sbjct 326346 AAAAATTCACCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATA 326405 Query 60116 CTCACCACTATACTACCGAGGA 60137 || ||||||||||||||||||| Sbjct 326406 CTGACCACTATACTACCGAGGA 326427 Score = 93.3 bits (102), Expect = 5e-14 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | |||||| |||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 366427 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 366368 Query 60126 TACTACCGAGGATT 60139 ||||| |||||||| Sbjct 366367 TACTATCGAGGATT 366354 Score = 91.5 bits (100), Expect = 2e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | |||||| |||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 322694 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTA 322635 Query 60126 TACTACCGAGGAT 60138 ||||| ||||||| Sbjct 322634 TACTATCGAGGAT 322622 Score = 91.5 bits (100), Expect = 2e-13 Identities = 65/75 (87%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | |||||| |||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 764866 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 764807 Query 60126 TACTACCGAGGATTG 60140 ||||| |||||| || Sbjct 764806 TACTATCGAGGACTG 764792 Score = 89.7 bits (98), Expect = 6e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | |||||| |||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 758940 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 758881 Query 60126 TACTACCGAGGA 60137 ||||| |||||| Sbjct 758880 TACTATCGAGGA 758869 >seq1581 Length=462264 Score = 98.7 bits (108), Expect = 1e-15 Identities = 66/74 (89%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| || | |||||| |||||| ||||||||||||||||||||| |||||||||||| Sbjct 251324 TCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 251383 Query 60125 ATACTACCGAGGAT 60138 |||||| ||||||| Sbjct 251384 ATACTATCGAGGAT 251397 Score = 93.3 bits (102), Expect = 5e-14 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| || | |||||| |||||| ||||||||||||||||||||| ||||| |||||| Sbjct 248749 TCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACT 248808 Query 60125 ATACTACCGAGGAT 60138 |||||| ||||||| Sbjct 248809 ATACTATCGAGGAT 248822 Score = 93.3 bits (102), Expect = 5e-14 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| || | |||||| |||||| ||||||||||||||||||||| ||||| |||||| Sbjct 249274 TCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACT 249333 Query 60125 ATACTACCGAGGAT 60138 |||||| ||||||| Sbjct 249334 ATACTATCGAGGAT 249347 Score = 91.5 bits (100), Expect = 2e-13 Identities = 65/75 (87%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | |||||| |||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 145853 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 145794 Query 60126 TACTACCGAGGATTG 60140 ||||| |||||| || Sbjct 145793 TACTATCGAGGACTG 145779 >seq2674 Length=1820225 Score = 96.9 bits (106), Expect = 4e-15 Identities = 70/81 (86%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 60061 ATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCAC 60120 |||| |||| || | |||||| |||||| |||||||||||||||||||| ||||| || Sbjct 1577537 ATTTACTCCCCGACGGGGAATTGAACCCCTGTCTCCCGCGTGACAGGCGGGGATACTAAC 1577478 Query 60121 CACTATACTACCGAGGATTGA 60141 |||||||||| |||||||||| Sbjct 1577477 CACTATACTATCGAGGATTGA 1577457 Score = 91.5 bits (100), Expect = 2e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | |||||| |||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 1578012 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 1578071 Query 60126 TACTACCGAGGAT 60138 ||||| ||||||| Sbjct 1578072 TACTATCGAGGAT 1578084 >seq958 Length=630956 Score = 96.9 bits (106), Expect = 4e-15 Identities = 71/83 (86%), Gaps = 0/83 (0%) Strand=Plus/Plus Query 60058 AAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACT 60117 || |||| |||| || | |||||| |||||| ||||||||||||||||||||| ||||| Sbjct 100943 AATATTTACTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACT 101002 Query 60118 CACCACTATACTACCGAGGATTG 60140 |||||||||||| |||||| || Sbjct 101003 GACCACTATACTATCGAGGACTG 101025 >seq115 Length=1161122 Score = 96.9 bits (106), Expect = 4e-15 Identities = 68/78 (87%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 60060 AATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCA 60119 |||| ||||| || | |||||| |||||| ||||||||||||||||||||| ||||| | Sbjct 318866 AATTATCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGA 318807 Query 60120 CCACTATACTACCGAGGA 60137 ||||||||||| |||||| Sbjct 318806 CCACTATACTATCGAGGA 318789 Score = 93.3 bits (102), Expect = 5e-14 Identities = 66/76 (87%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 60063 TTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCA 60122 || |||| || | |||||| |||||| ||||||||||||||||||||| ||||| |||| Sbjct 319039 TTACTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCA 319098 Query 60123 CTATACTACCGAGGAT 60138 |||||||| ||||||| Sbjct 319099 CTATACTATCGAGGAT 319114 Score = 89.7 bits (98), Expect = 6e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | |||||| |||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 318391 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 318450 Query 60126 TACTACCGAGGA 60137 ||||| |||||| Sbjct 318451 TACTATCGAGGA 318462 >seq880 Length=646355 Score = 95.1 bits (104), Expect = 1e-14 Identities = 66/75 (88%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 60064 TTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 60123 |||||| || | |||||| |||||| ||||||||||||||||||||| ||||| ||||| Sbjct 538528 TTCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCAC 538469 Query 60124 TATACTACCGAGGAT 60138 ||||||| ||||||| Sbjct 538468 TATACTATCGAGGAT 538454 Score = 91.5 bits (100), Expect = 2e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | |||||| |||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 548967 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 548908 Query 60126 TACTACCGAGGAT 60138 ||||| ||||||| Sbjct 548907 TACTATCGAGGAT 548895 >seq425 Length=891692 Score = 93.3 bits (102), Expect = 5e-14 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| || | |||||| |||||| ||||||||||||||||||||| ||||| |||||| Sbjct 453239 TCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACT 453298 Query 60125 ATACTACCGAGGAT 60138 |||||| ||||||| Sbjct 453299 ATACTATCGAGGAT 453312 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571793969637680