Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25]
3,306 sequences; 462,505,359 total letters
Query= NC_002520.1
Length=232392
Score E
Sequences producing significant alignments: (Bits) Value
seq2558 100 4e-16
seq2605 91.5 2e-13
seq603 86.0 9e-12
>seq2558
Length=2100711
Score = 100 bits (110), Expect = 4e-16
Identities = 187/275 (68%), Gaps = 0/275 (0%)
Strand=Plus/Plus
Query 10353 GATTTAAAAAGTGCATATGATTATATTGTTTCAGCACATGATAAAAAATTAATAAAAACT 10412
||||||||||| || || ||| | | | |||| | || ||| | | || |||
Sbjct 1047006 GATTTAAAAAGCGCTTACGATGTGAATATACCAGCGCGTGGAAAAGCTGTGGTGAAGACT 1047065
Query 10413 GATTTAATTATAGAAATTCCTAAAGGATGTTATGCAAGATTAGCTCCCAGATCTGATTTA 10472
||||| || || | || | |||| ||| | | | | || || | |||| ||
Sbjct 1047066 GATTTGCAAGTACAAGTACCAGAGGGATCTTACGGACGTGTTGCGCCACGCTCTGGACTA 1047125
Query 10473 GCTCTAAATAAATTTATTGATATTGGAGCTGGAGTAATTGACGAAGATTATAGAGGAAAT 10532
||| | || || ||||| ||| |||| |||||||| | || ||||| || | || ||
Sbjct 1047126 GCTGTTAAGAACTTTATAGATGTTGGTGCTGGAGTTGTAGATGAAGACTACCGTGGTAAC 1047185
Query 10533 GTGGGAGTAATATTATTTAATCATTCTAATGAAGATTTTATAATAAATAGAGGAGATAGA 10592
|||| || |||||||||||||||| |||||||||| | | || |||||||| ||
Sbjct 1047186 TTGGGCGTTGTATTATTTAATCATTCAGATGAAGATTTCGAAGTGAAACGAGGAGATCGA 1047245
Query 10593 ATATCTCAATTAATATGTGAAAAAATTTTATATCC 10627
|| | ||||| || ||||| ||||| |||||
Sbjct 1047246 ATTGCACAATTTATCTGTGAGCGCATTTTCTATCC 1047280
>seq2605
Length=276952
Score = 91.5 bits (100), Expect = 2e-13
Identities = 152/228 (67%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
||||||||||| | | ||| ||||| || ||||| ||||| |||||||| || |
Sbjct 242123 CCACCTCTAAGACGAAGTACTAAATGCAATGTAGACTCTTTCTGAATATTATAGTCAGCC 242064
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
| || | | ||| || ||||| ||||| |||||||| | | || ||||| || |||
Sbjct 242063 AATGTGCGACCATCTTCCAATTGCTTTCCGGCAAAAATTAGACGCTGTTGATCAGGGGGA 242004
Query 146171 ATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTACT 146230
|||||||| |||||||| |||||| ||| || ||
Sbjct 242003 ATTCCTTCCTTATCTTGAATTTTGGCCTTAACATGTTCAATAGTATCCGAAGGCTCAACC 241944
Query 146231 TCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCATT 146278
|| || ||||| || ||||| || | ||||| | ||| |||||||||
Sbjct 241943 TCAAGAGTGATGGTCTTACCCGTAAGGGTTTTTACGAAAATTTGCATT 241896
>seq603
Length=780983
Score = 86.0 bits (94), Expect = 9e-12
Identities = 101/137 (74%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
|| || | ||| | || |||||||| | || ||||| || |||||| || || ||
Sbjct 747779 CCTCCGCGAAGACGTAGCACCAAATGGAGTGTCGATTCCTTCTGTATATTGTAGTCGGAC 747720
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
| ||| | | ||| || | ||| || || ||||||||||| | ||| ||||| || |||
Sbjct 747719 AAAGTACGTCCATCCTCAAGTTGCTTGCCGGCAAAAATCAAACGTTGTTGATCTGGTGGA 747660
Query 146171 ATTCCTTCTTTATCTTG 146187
|| ||||||||||||||
Sbjct 747659 ATGCCTTCTTTATCTTG 747643
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 743495673771520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |