Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25]
3,306 sequences; 462,505,359 total letters
Query= NC_002686.2
Length=124784
Score E
Sequences producing significant alignments: (Bits) Value
seq314 145 6e-30
>seq314
Length=932230
Score = 145 bits (160), Expect = 6e-30
Identities = 242/347 (70%), Gaps = 2/347 (1%)
Strand=Plus/Minus
Query 20306 TAGATCAATTACAAAATGTTATTAATTTAATTAAAACGAACCCAAACGACAGAAGAATTA 20365
|||||||| | || | || ||| | || | || || ||||| || || | ||||
Sbjct 384386 TAGATCAACTTCAGCAAGTAATTGACACTATCAGAAATAATCCAAATGATCGACGTATTA 384327
Query 20366 TTTTATGCGCCTGGAACGCTAAAGATGTGCCTTTAATGGCTTTGCCTCCATGTCATATGC 20425
| | | || ||||| || ||| | ||| |||||| | || || |||||| |
Sbjct 384326 TAATGTCTGCTTGGAATCCTGTCGATATCCCTCAAATGGCGCTACCACCTTGTCATTGTC 384267
Query 20426 TATGC-CAATTTTACGTTGCTAATAATGAATTGTCGTGTCAAATGTATCAACGATCCGCT 20484
| ||| ||||||| ||||| ||| || || || |||||| | || ||||| ||
Sbjct 384266 T-TGCACAATTTTTTGTTGCCAATGGAGAGTTATCTTGTCAATTATACCAACGCAGTGCC 384208
Query 20485 GATATGGGACTGGGTGTTCCTTTCAATATTGCAAGTTATGCGCTGCTTACGTATATGATT 20544
||||||||| ||||||| || || |||||||| || || ||||||| |||||||||
Sbjct 384207 GATATGGGATTGGGTGTACCATTTAATATTGCCTCGTACGCTTTGCTTACCTATATGATT 384148
Query 20545 GCACATGTTACAGATTTAAAAACGGGTGACTTAGTCCACACCATAGGAGACGCGCATATT 20604
|| ||| |||| ||| | | | || || || |||||||| | || || || ||| |
Sbjct 384147 GCTCATATTACTGATCTCCGACCAGGGGATTTCGTCCACACTTTGGGCGATGCACATGTC 384088
Query 20605 TACCTTAATCATATAGAACCTTTAAAATTACAGTTAACACGACAACC 20651
|| ||||||||| ||| | |||||| ||||||||| ||| ||||
Sbjct 384087 TATAATAATCATATTGAAGCATTAAAAGAACAGTTAACGCGAGAACC 384041
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 399167916128170
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |