Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25] 3,306 sequences; 462,505,359 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq314 145 6e-30 >seq314 Length=932230 Score = 145 bits (160), Expect = 6e-30 Identities = 242/347 (70%), Gaps = 2/347 (1%) Strand=Plus/Minus Query 20306 TAGATCAATTACAAAATGTTATTAATTTAATTAAAACGAACCCAAACGACAGAAGAATTA 20365 |||||||| | || | || ||| | || | || || ||||| || || | |||| Sbjct 384386 TAGATCAACTTCAGCAAGTAATTGACACTATCAGAAATAATCCAAATGATCGACGTATTA 384327 Query 20366 TTTTATGCGCCTGGAACGCTAAAGATGTGCCTTTAATGGCTTTGCCTCCATGTCATATGC 20425 | | | || ||||| || ||| | ||| |||||| | || || |||||| | Sbjct 384326 TAATGTCTGCTTGGAATCCTGTCGATATCCCTCAAATGGCGCTACCACCTTGTCATTGTC 384267 Query 20426 TATGC-CAATTTTACGTTGCTAATAATGAATTGTCGTGTCAAATGTATCAACGATCCGCT 20484 | ||| ||||||| ||||| ||| || || || |||||| | || ||||| || Sbjct 384266 T-TGCACAATTTTTTGTTGCCAATGGAGAGTTATCTTGTCAATTATACCAACGCAGTGCC 384208 Query 20485 GATATGGGACTGGGTGTTCCTTTCAATATTGCAAGTTATGCGCTGCTTACGTATATGATT 20544 ||||||||| ||||||| || || |||||||| || || ||||||| ||||||||| Sbjct 384207 GATATGGGATTGGGTGTACCATTTAATATTGCCTCGTACGCTTTGCTTACCTATATGATT 384148 Query 20545 GCACATGTTACAGATTTAAAAACGGGTGACTTAGTCCACACCATAGGAGACGCGCATATT 20604 || ||| |||| ||| | | | || || || |||||||| | || || || ||| | Sbjct 384147 GCTCATATTACTGATCTCCGACCAGGGGATTTCGTCCACACTTTGGGCGATGCACATGTC 384088 Query 20605 TACCTTAATCATATAGAACCTTTAAAATTACAGTTAACACGACAACC 20651 || ||||||||| ||| | |||||| ||||||||| ||| |||| Sbjct 384087 TATAATAATCATATTGAAGCATTAAAAGAACAGTTAACGCGAGAACC 384041 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399167916128170