Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25]
3,306 sequences; 462,505,359 total letters
Query= NC_003027.1
Length=150773
Score E
Sequences producing significant alignments: (Bits) Value
seq2718 223 3e-53
>seq2718
Length=1670031
Score = 223 bits (246), Expect = 3e-53
Identities = 478/710 (67%), Gaps = 6/710 (1%)
Strand=Plus/Minus
Query 14018 CCTAGTTCTAATAGTAATCTATCCGCAATGAACTCAATATATTGAGACATTAAATCACAA 14077
||||| || | || || | ||| || | || || ||||| | ||||||| | |||
Sbjct 71508 CCTAGCTCGACAAGCAAACGATCAGCCACAAATTCGATATAATCGGACATTAGTTTGCAA 71449
Query 14078 TTCATACCTATTAGTTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACA 14137
|||||||| ||||| || || || | | ||||| ||||| | || || |||
Sbjct 71448 TTCATACCGATTAGATTCACCGGCAAAGCGTCAGTTAAGAATTCCTGCTCAATTTTAACA 71389
Query 14138 GCCTCGTTTATAATAATCGTAATAATTTCATTAGAAGGAGGATATTTTAGATGTTTAAAA 14197
|| || || || |||| |||||| || | | ||| ||||| ||
Sbjct 71388 GCTTCAGAAATTATTTCAACAATACGCTCATTACTTGGTTTTTGTATTAAATGTTGGAAC 71329
Query 14198 ATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAAT 14257
|| ||||| || || ||||||||||| |||||||||| ||| ||||| || ||||||
Sbjct 71328 ATCAAACATGCGAAGTCACAATGAAGTCCCTCATCTCGTGAAATTAGTTCATTGGAAAAT 71269
Query 14258 GTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAA 14317
|| || |||||||| || || ||||| || | ||| || || | ||| || ||
Sbjct 71268 GTCAAGCCTGGCATTAAACCACGTTTCTTAAGCCAGAAGATCGAAGCAAAACTGCCACTG 71209
Query 14318 AAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTG 14377
||||| || || ||||| |||||||| || |||| ||||| ||||| || ||
Sbjct 71208 AAGAAAATACCTTCAACGGCAGCAAATGCAATTACACGTTCACCAAAGTTGGCCGACTTC 71149
Query 14378 TTCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATA 14437
|| ||||| ||||| || | || || | | |||||| || |||
Sbjct 71148 GAAGAAATCCAAGCAAGCGCCCAATCTGCCTTACGCTTTACGGCAGGCATTGTCTCTATA 71089
Query 14438 GCATTAAATAAATG-TTCCTTCTCTTT--AGTACTTGAAATGTATGTATCAATAAGTAAG 14494
||||| ||||| |||||| | ||| ||| ||| ||| ||||||||||| | || |
Sbjct 71088 GCATTGAATAAGCAATTCCTT-TGTTTCGAGTCCTT--AATATATGTATCAATTAATATG 71032
Query 14495 CTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCT 14554
|||||||||||||| || | || ||||| || || ||||| ||||| || || | ||
Sbjct 71031 CTATACATTTCAGAATGCACATTCTCCATCGCAATTTGAAATCCATAGAAGCAACGTGCC 70972
Query 14555 TCTGACCATTGTACCTCTGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCA 14614
|||| | ||| || || | | || | ||| | | ||||||||| || |||||||||
Sbjct 70971 TCTGTCACTTGGACTTCCTGGCAGAAGCGTTCAACTACATTTTCATTCACAATACCATCA 70912
Query 14615 CTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGCTGAGTTTT 14674
|| || ||||| || || | || |||||| | | | || | || |||| |
Sbjct 70911 GATGCGGCGAAAAAGGCTAACACGTGGGAAATAAAATGTCGTTCATTATCAGTGAGGCGT 70852
Query 14675 TTCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAA 14724
|||||| | | ||| ||||||||||||||||| || |||||||| ||
Sbjct 70851 GCCCAATCATCCATATCTTTAGAAAGATCTACTTCCTCTACTGTCCAGAA 70802
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 482325667068080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |