Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25]
3,306 sequences; 462,505,359 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq3107 499 3e-136
seq2718 237 1e-57
seq603 109 5e-19
seq2605 89.7 5e-13
>seq3107
Length=1323484
Score = 499 bits (552), Expect = 3e-136
Identities = 1294/1956 (66%), Gaps = 57/1956 (3%)
Strand=Plus/Plus
Query 22106 TTGTCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATGCCC 22165
|| ||||| ||||| ||||| || ||||| || ||||| || || | |||||||||||||
Sbjct 934418 TTATCCACAGTAAATTGTATAGCATTTGCAGCTGGTTTCGTACGCAAATAATACATGCCC 934477
Query 22166 GTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTCGGC 22225
||||| ||||| |||||| || | |||||||| || || | || ||||| | |||
Sbjct 934478 GTCTTGAGACCTGCCTTCCAGCCGAAGAAATGTATAGAAGTAAGCTTACCATAGTTGGGC 934537
Query 22226 AAGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCGGCC 22285
||| || | |||||||||||||| |||||||| || || || ||||| || |||
Sbjct 934538 TCAGCCACGTGTATGTTGAACGACTGACTTTGATCGATGAATGCACCGCGATCTGCAGCC 934597
Query 22286 ATATTTATCAATGTACGCATCGACATTTCCCATACGGTCTTGTACAGTTGCCTGATCTCT 22345
|| || || |||| || || || ||||| || || ||||| || | | || |
Sbjct 934598 ATTTTGATTGATGTTTTCACGGAAATCTCCCAAACAGTTTTGTATAGATCGCGTATGTGC 934657
Query 22346 AACGGTATCGATTCGATCCTCTGGACGGACCCGTTATTGTGTATGATCAAATTTTTAATC 22405
||||| ||||| || | || | ||| ||| | || ||| || ||| || ||
Sbjct 934658 TGTGGTATGGATTCAATATTTTGTATGGAGCCGCGACTGGTTATAATATTATTCTTCATA 934717
Query 22406 GTATCGTTCCACAAACCGATGGCGGTCAAATCTTTGACCAGATGACGGTTCACCACTTGA 22465
||| | ||||||||| | |||| | ||| | || ||| | || || ||||||
Sbjct 934718 TCATCATCCCACAAACCCAACTCGGTTAGATCGCGCAACAAGTGATGATTTACAACTTGA 934777
Query 22466 AACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAAGATTCA 22525
|| || || || | || || ||| ||||| ||||| ||| | ||||| || || |||
Sbjct 934778 AATTCACCTGAAAGCACACGACGTGTATAAATATTGGAAGTGTATGGTTCAAATGACTCA 934837
Query 22526 TTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGCGAGTTT 22585
||||| |||| || || || || ||||| || ||||| ||||| | ||||| |||||
Sbjct 934838 TTGTTGCCCATAATTTGTGCTGTTGAAGCAGTTGGCATGGGCGCAAGCAGTAAAGAGTTG 934897
Query 22586 CTCAAGCC---GTGCTTTGAAATTTTACTCTTGAGCATCGACCAGTCCCACAGATCGGAC 22642
| | || |||||| ||||| ||| | | ||| | ||| ||||| |
Sbjct 934898 CGGACACCATGTTGCTTT---ATTTTCTCCTTCAATTCGGTCCAATTCCAAAGATCAGTT 934954
Query 22643 GGCGTCACATTGTCCCACATATCGTATTGCAACACGCCGCGACTCGCCGGGCTGCCTTCG 22702
|| || || |||||||| || || || | | || ||| | || ||||||
Sbjct 934955 GGTGT---TTTATCCCACATGTCATACTGTAGAATACCCTTACTAACGGGTGAACCTTCG 935011
Query 22703 TACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTCCAACGCGCCGTAA 22762
|| ||||| || || ||| | | |||| | |||||| || || ||||| ||||| ||
Sbjct 935012 TAAGTTTCATAGGGGCCAAGTTTTTCGGCTAATTCGCAACTAGCTTCCAAGGCGCCATAG 935071
Query 22763 TATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCGGCGGCGACGCTTTCGTACGGCATA 22822
|| || || ||||| |||| || ||||| || | | |||||||| || |
Sbjct 935072 TAAATTGTTTCGAATATTTGCTGATTCAAAAGTAATGCTTCTTCACTTTCGTATGGATAA 935131
Query 22823 CGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATCGGTCGGTTTTTC 22882
||||| | | || ||||| || | |||||| || || |||||||| || || | | |
Sbjct 935132 CGCATTAAAATTAAAGCGTCAGCAAAACCCTGTACTCCAATACCGATGGGACGATGTCTG 935191
Query 22883 AGATTCGACACTTTTGCCTCGGGCAAAGGATACCAATTCGAATCGATTGTTCTGTTCAAG 22942
| |||||| ||||||| || || ||||| ||| || ||| || | |||||
Sbjct 935192 AAATTCGATTTCCTTGCCTCCGGTAAGGGATAATGATTAATGTCTATTATTTTATTCAAA 935251
Query 22943 TTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCGTAAACG----CCCGA 22998
|| | || || |||| || | | |||||||| ||| ||
Sbjct 935252 TTACGTGTAACGGTTTTGGTGACCTCTTTGAGGCGCTTAAAGTCGT--ACGTTTTTTCGG 935309
Query 22999 TTGTACAACAAACTTGTTGACGGCGATCGAGGCAAGATTGCATACGGCCACCTCGTCTTT 23058
||| |||||| | || | ||||| || || | ||||| || || ||||| ||
Sbjct 935310 GTGT--GACAAACATATTCAACGCGATTGAAGCCAAGTTGCACACAGCTACCTCATCAGG 935367
Query 23059 GGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTGCCCAAATTGCT 23118
| | || || |||||||||||||||| ||| |||||||| || || || | |||
Sbjct 935368 TGCTGAATATTCCACAATTTCGGTACATAAATTACTACACTTAATTGTACCAACATTCTG 935427
Query 23119 CTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGAC 23178
|| || || |||||||| || | ||| || || | |||||| || ||||| ||||| ||
Sbjct 935428 TTGATTACTCTTTCGATTACAAGCATCTTTATACAACATGTATGGTGTGCCGGTCTCCAC 935487
Query 23179 CTGCGACTCGATGATCGCT-CGCCACATAGTCTGAGCGTGAAC-----ACGTCGCACGTA 23232
||||| || || || ||| ||| | | | || || | || | ||||||
Sbjct 935488 TTGCGATTCAATAAT-GCTAAACCAAAGACTTTGTGCTTTTACTTTCTTATTAGCACGT- 935545
Query 23233 CCTGCCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGTAACAGTCGGC 23292
||||| | || || || | || || || || || |||| | ||
Sbjct 935546 ----CCTTCCTGTTCATATTTCAGATATAATTTTTCGAACTCTTCACCCCATACTTCATG 935601
Query 23293 CAGGCCGGG-CGATTGCATCGGACACATGAGACTCCACATTGAGTCATT---TTCAACGC 23348
|| ||||| | ||| | |||||||| || ||| | ||||| ||| || |
Sbjct 935602 TAGACCGGGACACTTGTGT-GGACACATTAGCGACCAGTCT---TCATTGGCTTCTACAC 935657
Query 23349 GTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCT 23408
|| ||||||| ||||| |||||||| | ||| || |||| || | |||||| ||| |
Sbjct 935658 GTTTCATAAATAGATCAGGTATCCACAAAGCATAAAACAAATCTCTGGCGCGATGCTCTT 935717
Query 23409 CTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGA 23468
|||| || ||||| || |||||||||||||| | || | || |||||||| || || |
Sbjct 935718 CTTTCCCAGTGTTTTTCTTCAAATCCAAAAATTGGAAAATATCAGCATGCCATGGTTCCA 935777
Query 23469 GGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGT 23528
|||| | |||||| ||||| || | ||| ||| || ||||| || || || || |
Sbjct 935778 GGTAGATGGCAAATGCGCCTGGACGTTTACCGCCACCTTGATCCACATAGCGTGCTACAT 935837
Query 23529 TGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACAC 23588
| ||| |||||| | ||| ||||| | |||||| || | ||| | ||||| |
Sbjct 935838 TATTGAACACTCGCAACATAGGCACCAAACCGTTTGATGTGCCATTTGTACCCGCAATTG 935897
Query 23589 TCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATA 23648
| |||||||| || | | || |||| | ||| || || || | ||||| || |
Sbjct 935898 CAGTGCCTTTTGCACGTATGCAATGTACGTTCAGACCAATACCCCCAGCAGATTTGGAAA 935957
Query 23649 TCATCGCGCATTG--TTTCAGAGTGTCGTAGATGCCCTCGATG---CTGTCCTCTTTGGT 23703
||| || ||||| | | || ||| | | || || || ||| |||| | ||||
Sbjct 935958 TCAATGCACATTGATGTGCCGA-TGT-GAAAATCCCATCAATGGAATCGTCCACCATGGT 936015
Query 23704 CGCGACCAAGAAACACGAAGACATTTGC-GCT--TTGGGCGTAGCGGCCGAGAACAGTGT 23760
| | | || || || |||| |||| ||| ||| || || || | ||| || ||
Sbjct 936016 C---AGTAGAAAGCATGATGACAATTGCGGCTGCTTG---GTGGCAGCAGCGAATAGCGT 936069
Query 23761 CGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATC 23820
|| || |||||||| || | | || | | ||||| || ||||| || |||||
Sbjct 936070 TGGAGAAGCATGCGTAAAATAACGTTCGGAAAGCAAGTTGTATGTTTCGATTGCTGCATC 936129
Query 23821 AATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGAC 23880
||||| || || |||||||||||||| || ||||| | ||| | || |||| ||| ||
Sbjct 936130 TATGTCTTCGCCATGTATACCGATGGCAACACGCATTAACATATGCTGTGGTCGCTCAAC 936189
Query 23881 CGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTC 23940
| ||| || | ||| | || ||| ||||||| | |||||||| |||||||| |
Sbjct 936190 AATTTTGCCATTTAATTTTAGCAAATAGGAACGTTCAAGAGTTTTAAAACCAAAATAATT 936249
Query 23941 ATAGTTAAAGTCACGATCGTGCACTATGGCCGAATTCAAACGGTACGCATTGGCAGC--G 23998
||| ||| || || || | | ||||| || || || || | ||||| | ||
Sbjct 936250 ATAACCAAAATCGCGGTCATAAATAATGGCAGAGTTTAAGCGATCAGCATT--CTGCTTT 936307
Query 23999 ATGATGTTGTAATGAAAATTCGATATCATCGGCGTT 24034
| || || |||||||| | ||||| ||||| |||
Sbjct 936308 ACGACATTATAATGAAAGTCGGATATTATCGGAGTT 936343
>seq2718
Length=1670031
Score = 237 bits (262), Expect = 1e-57
Identities = 387/552 (70%), Gaps = 18/552 (3%)
Strand=Plus/Plus
Query 57589 AGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTGAGCGATT 57648
|||||||||||||||| ||||| || || |||||||| || ||||| ||| || ||||
Sbjct 70788 AGGCAGAAGCATCGTTCTGGACAGTAGAGGAAGTAGATCTTTCTAAAGATATGGATGATT 70847
Query 57649 GGGATTCCCTCAAAGAATCTGAGAGAAATTTTATTAAACACGTGTTGGCGTTTTTCGCCG 57708
||| ||||| || ||| || |||||||| |||||||| || ||||||||||
Sbjct 70848 GGGCACGCCTCACTGATAATGAACGACATTTTATTTCCCACGTGTTAGCCTTTTTCGCCG 70907
Query 57709 CATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGATTTTCACAAGAAGTGCAAGTGA 57768
|||| ||||||||||| || || ||| | || ||| | || | || ||||| |||||||
Sbjct 70908 CATCTGATGGTATTGTGAATGAAAATGTAGTTGAACGCTTCTGCCAGGAAGTCCAAGTGA 70967
Query 57769 CGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATTGAAAACGTGCATTCAGAAATGT 57828
| ||||| | ||||| || ||||||||| | || || || || |||||||| |||||||
Sbjct 70968 CAGAGGCACGTTGCTTCTATGGATTTCAAATTGCGATGGAGAATGTGCATTCTGAAATGT 71027
Query 57829 ATTCGCTACTCATCGATACGTACGTGAAGGACAACGACGAGAAACG--TAGACTGTTCAA 57886
|| || | || ||||| || | |||||| ||| | ||| | | | | |||||
Sbjct 71028 ATAGCATATTAATTGATACATATATTAAGGAC-TCGA-AACAAAGGAATTGCTTATTCAA 71085
Query 57887 CGCGATCGAAACAATGCCCGCGATCGCCAAG---AAGGCAGAGTGGTCAATCAAATGGA- 57942
|| || || |||||||| || || ||| |||||||| ||| | | ||||
Sbjct 71086 TGCTATAGAGACAATGCCTGC---CGTAAAGCGTAAGGCAGATTGGGCGCTTGCTTGGAT 71142
Query 57943 ---TAAAAAGCGCCACGGCCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAG 57999
| ||| |||||| || | || | |||| || || || ||||| ||||
Sbjct 71143 TTCTTCGAAG----TCGGCCAACTTTGGTGAACGTGTAATTGCATTTGCTGCCGTTGAAG 71198
Query 58000 GTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGC 58059
|||| ||||| ||||| ||||| | || || ||| | |||||||| || | ||||
Sbjct 71199 GTATTTTCTTCAGTGGCAGTTTTGCTTCGATCTTCTGGCTTAAGAAACGTGGTTTAATGC 71258
Query 58060 CCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAGGGTCTCCATACTGATTTTG 58119
| ||| |||| ||| ||| || | || || || || ||||| || ||| ||| || |
Sbjct 71259 CAGGCTTGACATTTTCCAATGAACTAATTTCACGAGATGAGGGACTTCATTGTGACTTCG 71318
Query 58120 CGTGCCTAATGT 58131
| || | ||||
Sbjct 71319 CATGTTTGATGT 71330
>seq603
Length=780983
Score = 109 bits (120), Expect = 5e-19
Identities = 154/214 (72%), Gaps = 2/214 (1%)
Strand=Plus/Plus
Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251
|||||| |||||||| || ||| |||| || ||||| ||||| | || ||||| || ||
Sbjct 745797 CATGCAGATTTTCGTCAAAACTTTGACGGGAAAAACCATCACTTTGGAGGTTGAGCCTTC 745856
Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311
||| | | || | |||||| | ||| || |||||||| | || || || ||
Sbjct 745857 CGATACCATTGAGAATGTCAAAGCTAAAATTCAAGATAAGGAAGGAATCCCCCCAGATCA 745916
Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATA 31370
|| ||| | || |||||||||||||||||||| || | | | || || ||| ||||
Sbjct 745917 ACAACGTTTGATTTTCGCTGGCAAACAGTTGGAGGA-TGGACGCACACTGTCCGACTATA 745975
Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404
| ||||| || ||||| ||||| ||| | || ||
Sbjct 745976 ATATTCAGAAGGAATCCACTCTACATTTAGTTCT 746009
>seq2605
Length=276952
Score = 89.7 bits (98), Expect = 5e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||||||||||||||| || || || || || || ||||| | || ||||| || ||
Sbjct 241897 ATGCAAATTTTCGTAAAAACCCTTACGGGTAAGACCATCACTCTTGAGGTTGAGCCTTCG 241956
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|| | | | ||| || || | ||| || |||||||| | || || || ||
Sbjct 241957 GATACTATTGAACATGTTAAGGCCAAAATTCAAGATAAGGAAGGAATTCCCCCTGATCAA 242016
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
||||||||||| || || || || || |||||||| | || || || |||||
Sbjct 242017 CAGCGTCTAATTTTTGCCGGAAAGCAATTGGAAGATGGTCGCACATTGGCTGACTATAAT 242076
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419
||||| ||||| || || | ||| | |||||| | || || || ||
Sbjct 242077 ATTCAGAAAGAGTCTACATTGCATTTAGTACTTCGTCTTAGAGGTGG 242123
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445747978703520
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