Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25] 3,306 sequences; 462,505,359 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq2718 105 1e-17 >seq2718 Length=1670031 Score = 105 bits (116), Expect = 1e-17 Identities = 212/314 (68%), Gaps = 3/314 (1%) Strand=Plus/Plus Query 101919 TTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGGA 101978 |||| |||||||| |||||||| || ||||| ||||| || || || || |||||| Sbjct 71178 TTGCATTTGCTGCCGTTGAAGGTATTTTCTTCAGTGGCAGTTTTGCTTCGATCTTCTGGC 71237 Query 101979 TCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGACG 102038 | ||||| | ||| | |||| || | || | |||||||| | ||||| | || | Sbjct 71238 TTAAGAAACGTGGTTTAATGCCAGGCTTGACATTTTCCAATGAACTAATTTCACGAGATG 71297 Query 102039 AAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATACCCCAT 102098 | || |||||| | ||||| ||||| || |||| || | ||| | | | ||| Sbjct 71298 AGGGACTTCATTGTGACTTCGCATGTTTGATGTTCCAACA---TTTAATACAAAAACCAA 71354 Query 102099 CAAGAGAAAGGATTCTTGAAATTGTCACTGAAGCCGTCCGAATTGAACAAGAATTTCTCA 102158 | || | ||| ||||||| | ||||||| || |||||| || ||||| | | Sbjct 71355 GTAATGAGCGTATTGTTGAAATAATTTCTGAAGCTGTTAAAATTGAGCAGGAATTCTTAA 71414 Query 102159 CAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCAGTACATTG 102218 | | | |||| || || || | || ||||| ||||| | ||| | | || || | Sbjct 71415 CTGACGCTTTGCCGGTGAATCTAATCGGTATGAATTGCAAACTAATGTCCGATTATATCG 71474 Query 102219 AATTTGTGGCAGAT 102232 |||||||||| ||| Sbjct 71475 AATTTGTGGCTGAT 71488 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989542083077230