Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25]
3,306 sequences; 462,505,359 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq2718 105 1e-17
>seq2718
Length=1670031
Score = 105 bits (116), Expect = 1e-17
Identities = 212/314 (68%), Gaps = 3/314 (1%)
Strand=Plus/Plus
Query 101919 TTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGGA 101978
|||| |||||||| |||||||| || ||||| ||||| || || || || ||||||
Sbjct 71178 TTGCATTTGCTGCCGTTGAAGGTATTTTCTTCAGTGGCAGTTTTGCTTCGATCTTCTGGC 71237
Query 101979 TCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGACG 102038
| ||||| | ||| | |||| || | || | |||||||| | ||||| | || |
Sbjct 71238 TTAAGAAACGTGGTTTAATGCCAGGCTTGACATTTTCCAATGAACTAATTTCACGAGATG 71297
Query 102039 AAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATACCCCAT 102098
| || |||||| | ||||| ||||| || |||| || | ||| | | | |||
Sbjct 71298 AGGGACTTCATTGTGACTTCGCATGTTTGATGTTCCAACA---TTTAATACAAAAACCAA 71354
Query 102099 CAAGAGAAAGGATTCTTGAAATTGTCACTGAAGCCGTCCGAATTGAACAAGAATTTCTCA 102158
| || | ||| ||||||| | ||||||| || |||||| || ||||| | |
Sbjct 71355 GTAATGAGCGTATTGTTGAAATAATTTCTGAAGCTGTTAAAATTGAGCAGGAATTCTTAA 71414
Query 102159 CAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCAGTACATTG 102218
| | | |||| || || || | || ||||| ||||| | ||| | | || || |
Sbjct 71415 CTGACGCTTTGCCGGTGAATCTAATCGGTATGAATTGCAAACTAATGTCCGATTATATCG 71474
Query 102219 AATTTGTGGCAGAT 102232
|||||||||| |||
Sbjct 71475 AATTTGTGGCTGAT 71488
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989542083077230
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |