Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25]
3,306 sequences; 462,505,359 total letters
Query= NC_003391.1
Length=205719
Score E
Sequences producing significant alignments: (Bits) Value
seq3107 517 1e-141
seq2718 286 5e-72
>seq3107
Length=1323484
Score = 517 bits (572), Expect = 1e-141
Identities = 1245/1857 (67%), Gaps = 44/1857 (2%)
Strand=Plus/Plus
Query 64860 GCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAA 64919
|| ||||||||||| | ||| ||||| ||||| || ||||| |||| ||| | |||
Sbjct 934448 GCTGGTTTCGTACGCAAATAATACATGCCCGTCTTGAGACCTGCCTTCCAGCCGAAGAAA 934507
Query 64920 TGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTT 64979
|| ||| || || || ||| | || || || | || || || | || ||||||
Sbjct 934508 TGTATAGAAGTAAGCTTACCATAGTTGGGCTCAGCCACGTGTATGTTGAACGACTGACTT 934567
Query 64980 TGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTAT-GATCGTCTTTTGTGGAATTTC 65038
||||||||||| || || | |||||||||||||| || ||| || || | ||| ||
Sbjct 934568 TGATCGATGAATGCACCGCGATCTGCAGCCATTTTGATTGAT-GTTTTCACGGAAATCTC 934626
Query 65039 CCAAATAGTTTTATAAAC-TCGCTTAATATCTTCTGGAA-GGTTTG--TATTCTGAATGG 65094
||||| |||||| || | |||| || | | | ||| | || || |||| || ||||
Sbjct 934627 CCAAACAGTTTTGTATAGATCGCGTA-TGTGCTGTGGTATGGATTCAATATTTTGTATGG 934685
Query 65095 ATCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTA 65154
| || | | | ||||| ||||||| || ||||||| ||| || ||||||||
Sbjct 934686 AGCCGCGACTGGTTATAATATTATTCTTCATATCATCATCCCACAAACCCAACTCGGTTA 934745
Query 65155 AAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGT 65214
| | | | | || |||| || ||||||||||| || || | || | || || |
Sbjct 934746 GATCGCGCAACAAGTGATGATTTACAACTTGAAATTCACCTGAAAGCACACGACGTGTAT 934805
Query 65215 AAATATTACTGGTATACGGTTCCACAGACTCATTATTTCCCAAAATTTGAGCAGTTGATG 65274
||||||| || || ||||| | |||||||| || |||| |||||| || ||||| |
Sbjct 934806 AAATATTGGAAGTGTATGGTTCAAATGACTCATTGTTGCCCATAATTTGTGCTGTTGAAG 934865
Query 65275 CAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTC--TGATTTTATC 65332
|||| ||||| || || | || |||| || | | ||| ||||| | ||||| ||
Sbjct 934866 CAGTTGGCATGGGCGCAAGCAGTAAAGAGTTGCGGACACC--ATGTTGCTTTATTTTCTC 934923
Query 65333 TTTTAGA--GGTTCCCAATTCCAAAGATCCGACGGTACAACNNNNNNNNNNNNNNNTTGT 65390
|| | ||| ||||||||||||||| | ||| |||
Sbjct 934924 CTTCAATTCGGT--CCAATTCCAAAGATCAGTTGGTGTTTTATCCCACATGTCATACTGT 934981
Query 65391 AGAATACCGTTACTGGCGTACGATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCT 65450
|||||||| ||||| || || ||| | || || || || || || || || |||
Sbjct 934982 AGAATACCCTTACTAACGGGTGAACCTTCGTAAGTTTCATAGGGGCCAAGTTTTTCGGCT 935041
Query 65451 AGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGA 65510
| ||| ||||| || || || || || || ||||| |||||||| || | || ||| | |
Sbjct 935042 AATTCGCAACTAGCTTCCAAGGCGCCATAGTAAATTGTTTCGAATATTTGCTGATTCAAA 935101
Query 65511 TCTTGTGCTTCCAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCT 65570
| |||||| || || |||||||| | | ||| || ||||| || || ||
Sbjct 935102 AGTAATGCTTCTTCACTTTCGTATGGATAACGCATTAAAATTAAAGCGTCAGCAAAACCC 935161
Query 65571 TGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCA--GCTTCTGGAATAG 65628
|| || ||||||||||| || | |||||| ||| || |||| || || || | |
Sbjct 935162 TGTACTCCAATACCGATGGGACGATGTCTGAAATTCGA--TTTCCTTGCCTCCGGTAAGG 935219
Query 65629 GATAATAATTAATATCTATAATTTTATTGAGATTTCTGACAATTACTTTGACCACATCCT 65688
|||||| |||||| ||||| |||||||| | ||| | || |||| || || |
Sbjct 935220 GATAATGATTAATGTCTATTATTTTATTCAAATTACGTGTAACGGTTTTGGTGACCTCTT 935279
Query 65689 TCAGTTTGAGAAAATCAAATCGCTCATC---TATTACAAACATGTTCAATGCAACAGATG 65745
| || ||| || | | || | | |||||||| ||||| || | || |
Sbjct 935280 TGAGGCGCTTAAAGTCGTACGTTTTTTCGGGTGTGACAAACATATTCAACGCGATTGAAG 935339
Query 65746 CCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGAT 65805
||| || || || |||||||||| || | | ||||| | || || || || | ||
Sbjct 935340 CCAAGTTGCACACAGCTACCTCATCAGGTGCTGAATATTCCACAATTTCGGTACATAAAT 935399
Query 65806 TACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTAT 65865
|||||||||| || || || | ||| ||||||||||||||| ||||| ||||| ||||
Sbjct 935400 TACTACACTTAATTGTACCAACATTCTGTTGATTACTCTTTCGATTACAAGCATCTTTAT 935459
Query 65866 AAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTC 65925
| | ||| |||| || || || || | || ||||| ||||| ||| | | ||||
Sbjct 935460 ACAACATGTATGGTGTGCCGGTCTCCACTTGCGATTCAATAAT-GCTAAACCAAAGACTT 935518
Query 65926 -GAGCCTTTATTATAG-ATTTGTATCTCTTTTCTCTTTCGTATAGTGTATACAATCGTTC 65983
| || |||| | | ||| | | || || || || | ||| ||| ||| |||
Sbjct 935519 TGTGCTTTTACTTTCTTATTAGCACGTCCTTCCTGTT-CATATTTCAGATATAATTTTTC 935577
Query 65984 GAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCA 66043
|||||| || ||||| || | | | || ||||| | | |||||||| | ||||||
Sbjct 935578 GAACTCTTCACCCCATACTTCATGTAGACCGGGACACTTGTGTGGACACATTAGCGACCA 935637
Query 66044 CTCTCCGTCATC--CTTC-ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAA 66100
||| |||| |||| || ||||||||||| |||||||| ||||| | ||| |||
Sbjct 935638 GTCT---TCATTGGCTTCTACACGTTTCATAAATAGATCAGGTATCCACAAAGCATAAAA 935694
Query 66101 TAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 66160
|||||||||| | ||| || || || || || || || || | ||| | || |
Sbjct 935695 CAAATCTCTGGCGCGATGCTCTTCTTTCCCAGTGTTTTTCTTCAAATCCAAAAATTGGAA 935754
Query 66161 AATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCC 66220
||||||| |||||| ||||||| ||| ||||| | | || || ||||| || ||
Sbjct 935755 AATATCAGCATGCCATGGTTCCAGGTAGATGGCAAATGCGCCTGGACGTTTACCGCCACC 935814
Query 66221 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGA 66280
||||| | || | || ||||| | |||| |||||| || | | ||| || ||
Sbjct 935815 TTGATCCACATAGCGTGCTACATTATTGAACACTCGCAACATAGGCACCAAACCGTTTGA 935874
Query 66281 TGTACCATTGGT-CCCGGAGATATAGCTTCCACTTGCACGAAT---AT-TACTAATTGAT 66335
||| ||||| || |||| | | || | || ||||||| || || ||| || |
Sbjct 935875 TGTGCCATTTGTACCCGCAATTGCAG-TGCCTTTTGCACGTATGCAATGTACG--TTCA- 935930
Query 66336 AGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACG-TATCATAGAT 66394
|||| || ||||| || ||| || || ||||| ||| | | | || | | | | ||
Sbjct 935931 -GACCAATACCCCCAGCAGATTTGGAAATCAATGCACATTGATGTGCCGATGTGAAA-AT 935988
Query 66395 GCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACT 66454
|| || || ||| |||| |||| | |||||||| || |||| ||| | | |
Sbjct 935989 CCCATCAATGGAATCGTCCACCATGGTCAGTAGAAAGCATGATGACAATTGCGGCTGCTT 936048
Query 66455 AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATT 66514
|| | ||| |||| || |||||||| |||||||| | ||| ||||| | ||
Sbjct 936049 GGTGGCAGCAGCGAATAGCGTTGGAGAAGCATGCGTAAAATAACGTTCGGAAAGCAAGTT 936108
Query 66515 GTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAA 66574
||| || || || |||| ||||| || ||| || || | || |||||||||||
Sbjct 936109 GTATGTTTCGATTGCTGCATCTATGTCTTCGCCATGTATACCGATGGCAACACGCATTAA 936168
Query 66575 CATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAA 66634
||| ||||| |||| ||||| || ||| |||| ||| | ||| ||||| ||| |
Sbjct 936169 CATATGCTGTGGTCGCTCAACAATTTTGCCATTTAATTTTAGCAAATAGGAACGTTCAAG 936228
Query 66635 AGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTT 66691
|||||||||||||||||| || || ||| || || || |||||||| | |||||
Sbjct 936229 AGTTTTAAAACCAAAATAATTATAACCAAAATCGCGGTCATAAATAATGGCAGAGTT 936285
>seq2718
Length=1670031
Score = 286 bits (316), Expect = 5e-72
Identities = 493/712 (69%), Gaps = 7/712 (1%)
Strand=Plus/Minus
Query 35983 AATCAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTAT 36042
|| ||| | ||| || |||||||| ||||| ||| | || |||||||| || ||
Sbjct 71497 AAGCAAACGATCAGCCACAAATTCGATATAATCGGACATTAGTTTGCAATTCATACCGAT 71438
Query 36043 AAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTAT 36102
|| || || || | ||| |||| | ||||| || ||||| || || || | ||
Sbjct 71437 TAGATTCACCGGCAAAGCGTCAGTTAAGAATTCCTGCTCAATTTTAACAGCTTCAGAAAT 71378
Query 36103 AATAG--ATATTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACAT 36160
|| | | ||| | | | ||| ||| | | |||||||| ||||||||||||
Sbjct 71377 TATTTCAACAATACGCT--CATTACTTGGTTTTTGTATTAAATGTTGGAACATCAAACAT 71320
Query 36161 GCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCG 36220
||||| || || || || ||||| |||| ||||| ||| |||||||| || | ||
Sbjct 71319 GCGAAGTCACAATGAAGTCCCTCATCTCGTGAAATTAGTTCATTGGAAAATGTCAAGCCT 71260
Query 36221 GGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATT 36280
||||||| ||||| || |||||||| || || || ||||| ||| ||||||||
Sbjct 71259 GGCATTAAACCACGTTTCTTAAGCCAGAAGATCGAAGCAAAACTGCCACTGAAGAAAATA 71200
Query 36281 CCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGC--ACTGTCATGTA-TC 36337
||||| || || ||||| ||||| | | || ||| | ||| ||| | | | ||
Sbjct 71199 CCTTCAACGGCAGCAAATGCAATTACACGTTCACCAAAGTTGGCCGACTTCGAAGAAATC 71140
Query 36338 CACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAG 36397
|| | |||||||| ||||| ||||| ||||||||||||||||||||| ||
Sbjct 71139 CAAGCAAGCGCCCAATCTGCCTTACGCTTTACGGCAGGCATTGTCTCTATAGCATTGAAT 71080
Query 36398 AGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCC 36457
| | || ||| || || |||| |||||||||||| || | |||||||||||
Sbjct 71079 AAGCAATTCCTTTGTTTCGAGTCCTTAATATATGTATCAATTAATATGCTATACATTTCA 71020
Query 36458 GAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGT 36517
||||| | || || || || ||||||||||| ||||| || | ||||| || | ||
Sbjct 71019 GAATGCACATTCTCCATCGCAATTTGAAATCCATAGAAGCAACGTGCCTCTGTCACTTGG 70960
Query 36518 ACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAA 36577
||||| || || ||||| ||| |||||||||||| || || ||| || || |||
Sbjct 70959 ACTTCCTGGCAGAAGCGTTCAACTACATTTTCATTCACAATACCATCAGATGCGGCGAAA 70900
Query 36578 AACGCCAATACATGTTTTATAAAATATTTTTCGTTTGGTGTTAGTTTATTCCAATCATTG 36637
|| || || || || ||||||| | ||| || || || ||||||||
Sbjct 70899 AAGGCTAACACGTGGGAAATAAAATGTCGTTCATTATCAGTGAGGCGTGCCCAATCATCC 70840
Query 36638 ATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCT 36689
||||||||||| | ||| ||||| || |||||||| || ||||| |||||||
Sbjct 70839 ATATCTTTAGAAAGATCTACTTCCTCTACTGTCCAGAACGATGCTTCTGCCT 70788
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658145601009040
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