Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25]
3,306 sequences; 462,505,359 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq3107 616 2e-171
seq2718 271 1e-67
>seq3107
Length=1323484
Score = 616 bits (682), Expect = 2e-171
Identities = 1269/1862 (68%), Gaps = 54/1862 (3%)
Strand=Plus/Plus
Query 78739 GCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAGAAA 78798
|| ||||||||||| | ||| ||||| ||||| || ||||| |||| ||| |||||
Sbjct 934448 GCTGGTTTCGTACGCAAATAATACATGCCCGTCTTGAGACCTGCCTTCCAGCCGAAGAAA 934507
Query 78799 TGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTT 78858
|| ||| || || || ||| | || || || | || || || | || ||||||
Sbjct 934508 TGTATAGAAGTAAGCTTACCATAGTTGGGCTCAGCCACGTGTATGTTGAACGACTGACTT 934567
Query 78859 TGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTAT-GATCGTCTTTTGTGGAATTTC 78917
||||||||||| || || | |||||||||||||| || ||| || || | ||| ||
Sbjct 934568 TGATCGATGAATGCACCGCGATCTGCAGCCATTTTGATTGAT-GTTTTCACGGAAATCTC 934626
Query 78918 CCAAATAGTTTTATAAAC-TCGCTTAATATCTTCTGGAA-GGTTTG--TATTCTGAATGG 78973
||||| |||||| || | |||| || | | | ||| | || || |||| || ||||
Sbjct 934627 CCAAACAGTTTTGTATAGATCGCGTA-TGTGCTGTGGTATGGATTCAATATTTTGTATGG 934685
Query 78974 ATCCACCATCTGCCATAATCCTATTCTTGATCTCTTCATTCCATAATTTTCTCTCGGTTA 79033
| || | | | ||||| ||||||| || || |||| ||| || ||||||||
Sbjct 934686 AGCCGCGACTGGTTATAATATTATTCTTCATATCATCATCCCACAAACCCAACTCGGTTA 934745
Query 79034 AAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGT 79093
| | | | | || |||| || ||||||||||| || || | || | || || |
Sbjct 934746 GATCGCGCAACAAGTGATGATTTACAACTTGAAATTCACCTGAAAGCACACGACGTGTAT 934805
Query 79094 AAATATTACTGGTATATGGTTCCACCGATTCATTATTTCCCAAAATTTGAGCAGTTGATG 79153
||||||| || |||||||| | || ||||| || |||| |||||| || ||||| |
Sbjct 934806 AAATATTGGAAGTGTATGGTTCAAATGACTCATTGTTGCCCATAATTTGTGCTGTTGAAG 934865
Query 79154 CCGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGATCTGATTTTATCTT 79213
| |||||||| || || | || |||| || | | ||| | | | ||||| || |
Sbjct 934866 CAGTTGGCATGGGCGCAAGCAGTAAAGAGTTGCGGACACCATGTTGCTTTATTTTCTCCT 934925
Query 79214 TTAGAGATTC---CCAATCCCAAAGATCAGACGGGACAACATTCCAAAGATCATATTGTA 79270
| | |||| ||||| ||||||||||| || || ||| | ||||| ||||
Sbjct 934926 TCA---ATTCGGTCCAATTCCAAAGATCAGTTGGTGTTTTATCCCACATGTCATACTGTA 934982
Query 79271 GAATACCGTTACTAGCGTATGATCCTGTGTATGTTTCATAAGGTCCTTCCTTTTCGGCTA 79330
||||||| |||||| || ||| ||| ||| |||||||| || || ||||||||||
Sbjct 934983 GAATACCCTTACTAACGGGTGAACCTTCGTAAGTTTCATAGGGGCCAAGTTTTTCGGCTA 935042
Query 79331 ATTCACAACTCGCCTCTAATGCTCCGTAATAAATGGTTTCGAAAATCTTCTTATTGAGAT 79390
|||| ||||| || || || || || || ||||| |||||||| || | || ||| | |
Sbjct 935043 ATTCGCAACTAGCTTCCAAGGCGCCATAGTAAATTGTTTCGAATATTTGCTGATTCAAAA 935102
Query 79391 CTTGTGCTTCTAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTT 79450
| ||||||| || || |||||||| | | ||| || ||||| || || || |
Sbjct 935103 GTAATGCTTCTTCACTTTCGTATGGATAACGCATTAAAATTAAAGCGTCAGCAAAACCCT 935162
Query 79451 GAACACCAATACCGATAGGTCTATGTCTCTTATTAGAAATTTC--AGCTTCTGGAATAGG 79508
| || ||||||||||| || | |||||| ||| | ||||| || || || | ||
Sbjct 935163 GTACTCCAATACCGATGGGACGATGTCTGAAATTCG--ATTTCCTTGCCTCCGGTAAGGG 935220
Query 79509 ATAATAATTAATATCTATAATTTTATTGAGATTCC---TGACTATTACTTTGACCACATC 79565
||||| |||||| ||||| |||||||| | ||| | | || || ||||| |
Sbjct 935221 ATAATGATTAATGTCTATTATTTTATTCAAATTACGTGTAACGGTTTTGGTGACCTC--- 935277
Query 79566 CTTTAGTTTGAGAAAATCAAA-TCGTCCATCTATT--------ACAAACATGTTCAACGC 79616
|||||| | ||| |||| | | | || |||||||| ||||||||
Sbjct 935278 ------TTTGAGGCGCTTAAAGTCGTACGTTTTTTCGGGTGTGACAAACATATTCAACGC 935331
Query 79617 GACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATTTCAGT 79676
|| || |||| || || || |||||||||| || | | ||||| | ||||| ||
Sbjct 935332 GATTGAAGCCAAGTTGCACACAGCTACCTCATCAGGTGCTGAATATTCCACAATTTCGGT 935391
Query 79677 GCAGAGGTTACTACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGC 79736
|| | |||||||||||||| || || | ||| ||||||||||||||| ||||| ||
Sbjct 935392 ACATAAATTACTACACTTAATTGTACCAACATTCTGTTGATTACTCTTTCGATTACAAGC 935451
Query 79737 ATCCTTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCA 79796
||| ||||| | ||| | || || || || || | || ||||| ||||| ||| |
Sbjct 935452 ATCTTTATACAACATGTATGGTGTGCCGGTCTCCACTTGCGATTCAATAAT-GCTAAACC 935510
Query 79797 GACGAC-TCGAGCCTTTA-TTATAGACTTGTATCTCTTTTCTCTTTCGTATTGTGTATAT 79854
| ||| | | || |||| || | | | | || || || ||| |||| ||||
Sbjct 935511 AAAGACTTTGTGCTTTTACTTTCTTATTAGCACGTCCTTCCT-GTTCATATTTCAGATAT 935569
Query 79855 AATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATC 79914
||| ||||||||| || ||||| || || | || || ||||| | || ||||||||
Sbjct 935570 AATTTTTCGAACTCTTCACCCCATACTTCATGTAGACCGGGACACTTGTGTGGACACATT 935629
Query 79915 AACGACCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCT 79974
| |||||| ||| ||| | | ||| ||||||||||| |||||||| ||||| | |||
Sbjct 935630 AGCGACCAGTCTTCATTGGCTTCTACACGTTTCATAAATAGATCAGGTATCCACAAAGCA 935689
Query 79975 ATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAAC 80034
||| | |||||||| | |||||| || || || || || || || | ||| | ||
Sbjct 935690 TAAAACAAATCTCTGGCGCGATGCTCTTCTTTCCCAGTGTTTTTCTTCAAATCCAAAAAT 935749
Query 80035 GCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTT 80094
| |||||||| |||||| ||||||| ||| ||||| | | || || |||||
Sbjct 935750 TGGAAAATATCAGCATGCCATGGTTCCAGGTAGATGGCAAATGCGCCTGGACGTTTACCG 935809
Query 80095 CCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCA 80154
|| || ||||| | || | || ||||| | |||| |||||| || | | |||
Sbjct 935810 CCACCTTGATCCACATAGCGTGCTACATTATTGAACACTCGCAACATAGGCACCAAACCG 935869
Query 80155 TTGGATGTACCATTGGT-CCCGGAGATATAGCTTCCACTGGCACGAAT---AT-TACTAA 80209
|| ||||| ||||| || |||| | | || | || | ||||| || || |||
Sbjct 935870 TTTGATGTGCCATTTGTACCCGCAATTGCAG-TGCCTTTTGCACGTATGCAATGTAC--G 935926
Query 80210 TTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACG-TATCA 80268
|| ||||| || ||||| || ||| || || ||||| ||| | | | || | | |
Sbjct 935927 TT--CAGACCAATACCCCCAGCAGATTTGGAAATCAATGCACATTGATGTGCCGATGTGA 935984
Query 80269 TAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGA 80328
| || || || ||| ||| || | |||| | |||||||| || |||| ||| |
Sbjct 935985 -AAATCCCATCAATGGAATCGTCCACCATGGTCAGTAGAAAGCATGATGACAATTGCGGC 936043
Query 80329 CGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGT 80388
| | || | ||| |||| || |||||||| |||||||| | ||| || ||
Sbjct 936044 TGCTTGGTGGCAGCAGCGAATAGCGTTGGAGAAGCATGCGTAAAATAACGTTCGGAAAGC 936103
Query 80389 AGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACACGC 80448
| ||||| || || || |||| ||||| || ||| || || | || ||||||
Sbjct 936104 AAGTTGTATGTTTCGATTGCTGCATCTATGTCTTCGCCATGTATACCGATGGCAACACGC 936163
Query 80449 ATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTT 80508
|||||||| ||||| |||| ||||| || ||| ||||| ||| | ||| || || |
Sbjct 936164 ATTAACATATGCTGTGGTCGCTCAACAATTTTGCCATTTAATTTTAGCAAATAGGAACGT 936223
Query 80509 TCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAG 80568
|| | |||||||||||||||||| || || ||| || || || |||||||| | |||
Sbjct 936224 TCAAGAGTTTTAAAACCAAAATAATTATAACCAAAATCGCGGTCATAAATAATGGCAGAG 936283
Query 80569 TT 80570
||
Sbjct 936284 TT 936285
>seq2718
Length=1670031
Score = 271 bits (300), Expect = 1e-67
Identities = 491/712 (69%), Gaps = 7/712 (1%)
Strand=Plus/Minus
Query 49785 AATCAATCTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTAT 49844
|| ||| | ||| || |||||||| ||||| ||| | || |||||||| || ||
Sbjct 71497 AAGCAAACGATCAGCCACAAATTCGATATAATCGGACATTAGTTTGCAATTCATACCGAT 71438
Query 49845 AAGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTAT 49904
|| || || || | ||| |||| | ||||| || ||||| || || || | ||
Sbjct 71437 TAGATTCACCGGCAAAGCGTCAGTTAAGAATTCCTGCTCAATTTTAACAGCTTCAGAAAT 71378
Query 49905 AATAG-ATCTA-ACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACAT 49962
|| | | | ||| | | | ||| ||| || | |||||||| ||||||||||||
Sbjct 71377 TATTTCAACAATACGCT--CATTACTTGGTTTTTGTATTAAATGTTGGAACATCAAACAT 71320
Query 49963 GCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCG 50022
||||| || || || || ||||| |||| ||||||||| |||||||| || | ||
Sbjct 71319 GCGAAGTCACAATGAAGTCCCTCATCTCGTGAAATTAGTTCATTGGAAAATGTCAAGCCT 71260
Query 50023 GGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATT 50082
||||||| ||||| || |||||||| || || || ||||| ||| ||||| ||
Sbjct 71259 GGCATTAAACCACGTTTCTTAAGCCAGAAGATCGAAGCAAAACTGCCACTGAAGAAAATA 71200
Query 50083 CCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCG--CTGTCATGTA-TC 50139
||||| || || ||||| |||| | | || ||| | |||| || | | | ||
Sbjct 71199 CCTTCAACGGCAGCAAATGCAATTACACGTTCACCAAAGTTGGCCGACTTCGAAGAAATC 71140
Query 50140 CACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAG 50199
|| | |||||||| ||||| ||||| |||||| || ||||| ||||| ||
Sbjct 71139 CAAGCAAGCGCCCAATCTGCCTTACGCTTTACGGCAGGCATTGTCTCTATAGCATTGAAT 71080
Query 50200 AGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCC 50259
| | || ||| || || |||| ||| ||||| || || | |||||||||||
Sbjct 71079 AAGCAATTCCTTTGTTTCGAGTCCTTAATATATGTATCAATTAATATGCTATACATTTCA 71020
Query 50260 GAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGC 50319
||||| | || || || || || |||||||| ||||| || | ||||| || | ||
Sbjct 71019 GAATGCACATTCTCCATCGCAATTTGAAATCCATAGAAGCAACGTGCCTCTGTCACTTGG 70960
Query 50320 ACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAA 50379
||||| || || |||||| ||| |||||||||||| || || ||| || || |||
Sbjct 70959 ACTTCCTGGCAGAAGCGTTCAACTACATTTTCATTCACAATACCATCAGATGCGGCGAAA 70900
Query 50380 AACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTAGTTTATTCCAATCATTG 50439
|| || || || || ||||||||| ||| || || || ||||||||
Sbjct 70899 AAGGCTAACACGTGGGAAATAAAATGTCGTTCATTATCAGTGAGGCGTGCCCAATCATCC 70840
Query 50440 ATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCT 50491
||||||||||| | ||||||||| || |||||||| || ||||| |||||||
Sbjct 70839 ATATCTTTAGAAAGATCTACTTCCTCTACTGTCCAGAACGATGCTTCTGCCT 70788
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718239117541840
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