Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25] 3,306 sequences; 462,505,359 total letters Query= NC_004778.3 Length=129593 Score E Sequences producing significant alignments: (Bits) Value seq1080 82.4 6e-11 >seq1080 Length=582364 Score = 82.4 bits (90), Expect = 6e-11 Identities = 134/194 (69%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 24927 AACCAAAGCGCGTGTTGTTGCCACGGCTCGTCATCTTGCTCCCAGTTGTCCAAACCGCCG 24986 ||||| ||||| || |||| ||| || |||||||| | ||||| | | | ||| | Sbjct 465646 AACCAGAGCGCATGCTGTTCCCAAGGTTCGTCATCATCATCCCAATCCTTGAGACCACAA 465587 Query 24987 TCGCAGTAAAAACATTTGACTTTGTCGCTACGGCCGGTGTAAAAGAAGCCAGCTTCTGCA 25046 | ||| ||| || || || || | | |||||| || ||||| ||||| || || Sbjct 465586 CCACAGCTAAAGCACTTAACGCGATCACCAGTGCCGGTATAGAAGAARCCAGCATCAGCT 465527 Query 25047 AGTTTTTCGGGCCGTTGCTTCAAACCGCGTGGCCACTCTGTAAATGTGCGCAAACGCGCA 25106 | ||| | || |||||||||| ||||||||| || | || | || ||||| || Sbjct 465526 AATTTCTTTGGACGTTGCTTCATGTTGCGTGGCCATTCAGCGAACGAACGTAAACGTGCC 465467 Query 25107 GCTTCTATCGCATA 25120 ||||| || ||||| Sbjct 465466 GCTTCGATGGCATA 465453 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414556096084564