Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25] 3,306 sequences; 462,505,359 total letters Query= NC_005905.1 Length=86462 Score E Sequences producing significant alignments: (Bits) Value seq3201 131 9e-26 >seq3201 Length=73348 Score = 131 bits (144), Expect = 9e-26 Identities = 191/270 (71%), Gaps = 0/270 (0%) Strand=Plus/Plus Query 3875 GGTGTACATTTTATGATGGCTGACGGTGGGTTCTCGGTTGAGGGTCAAGAAAATATGCAA 3934 || || ||||| | ||||| || || ||||| || |||||||||||||||||||| ||| Sbjct 23536 GGAGTTCATTTCGTTATGGCAGATGGAGGGTTTTCAGTTGAGGGTCAAGAAAATATTCAA 23595 Query 3935 GAAATGTTATCGAAAAAGATGTATTTGTGTCAATGTTTAATTGCATTGATGATCATACGA 3994 ||||| | || || | | ||||||||||||||||| || ||| | | ||| | ||| Sbjct 23596 GAAATTCTTTCTAAGCAACTTTATTTGTGTCAATGTTTGATGGCACTAAAAATCCTTCGA 23655 Query 3995 ATTGGTGGTCATTGTGTTATCAAATTTTTCGATATATTTACACCTTTTAGTGCTGGTTTA 4054 || || || | || |||||| || ||| |||| || || |||||| || | Sbjct 23656 GTTAACGGAAGTTTTCTTTGCAAATTATTTGATTTATTCACGCCATTTAGTATAGGACTG 23715 Query 4055 GTGTATTTGATGTATAGATCTTTTAATCGTATTTGTATTTTCAAACCACATTCATCGCGA 4114 | | ||| ||||||| || |||| ||| || | ||| || ||||| || || Sbjct 23716 ATATTTTTAATGTATAAATGTTTTGATCAGATATCTATATTGAAACCTAATAGTAGTAGA 23775 Query 4115 CCGGCCAATTCTGAAAGATATTTGGTGTGT 4144 ||||| ||||| || ||||||| || ||| Sbjct 23776 CCGGCGAATTCAGAGCGATATTTAGTTTGT 23805 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 276542457136918