Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25] 3,306 sequences; 462,505,359 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq603 107 2e-18 >seq603 Length=780983 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858 ||||| || | ||||| ||||| || | ||| |||||| || |||| || ||| Sbjct 745778 ACCAAATGAAGTGTAGACTCCTTCTGGATGTTGTAATCGGACAGAGTGCGTCCGTCTTCC 745719 Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918 || ||||| ||| |||||||||| | ||| |||||||| || || ||||||||||| | | Sbjct 745718 AGTTGTTTACCGGCAAAGATTAAACGTTGTTGATCTGGGGGGATTCCTTCTTTGTCTTGA 745659 Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978 || || || || || | | ||| || | | || || || | |||||||| || Sbjct 745658 ATCTTAGCTTTAACATTTTCAATAGTATCGGATGGTTCAACCTCCAGAGTGATGGTCTTG 745599 Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||||| | || ||||| ||||| ||||| Sbjct 745598 CCAGTCAAGGTCTTCACGAAGATTTGCAT 745570 Score = 96.9 bits (106), Expect = 3e-15 Identities = 148/211 (70%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858 || || || | ||| |||||||| || | ||||| ||| || ||| ||||||| Sbjct 746006 ACTAAATGTAGAGTGGATTCCTTCTGAATATTATAGTCGGACAGTGTGCGTCCATCCTCC 745947 Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918 | |||||| || | || || || | ||| |||||||| || || ||||| || || | | Sbjct 745946 AACTGTTTGCCAGCGAAAATCAAACGTTGTTGATCTGGGGGGATTCCTTCCTTATCTTGA 745887 Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978 ||||| || ||||| | | || || | | || || || | |||||||||||| Sbjct 745886 ATTTTAGCTTTGACATTCTCAATGGTATCGGAAGGCTCAACCTCCAAAGTGATGGTTTTT 745827 Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 || || | |||||| || || |||||||||| Sbjct 745826 CCCGTCAAAGTTTTGACGAAAATCTGCATGC 745796 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857 |||||| || | || |||||||| || | || || ||| || ||| |||||| Sbjct 747762 CACCAAATGGAGTGTCGATTCCTTCTGTATATTGTAGTCGGACAAAGTACGTCCATCCTC 747703 Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917 || || || ||| |||| || || | ||| |||||||| ||||| |||||||| || | Sbjct 747702 AAGTTGCTTGCCGGCAAAAATCAAACGTTGTTGATCTGGTGGAATGCCTTCTTTATCTTG 747643 Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977 || || ||||| || | | || || | | | ||||| || | ||||||||||| Sbjct 747642 GATCTTAGCCTTAACATTCTCAATGGTATCTGAGGGCTCGACTTCCAAGGTGATGGTTTT 747583 Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||||| || || || || ||||| ||||| Sbjct 747582 GCCAGTGAGGGTCTTAACGAAGATTTGCAT 747553 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448272674366160