Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25] 3,306 sequences; 462,505,359 total letters Query= NC_006658.1 Length=30655 Score E Sequences producing significant alignments: (Bits) Value seq2577 105 1e-18 >seq2577 Length=312064 Score = 105 bits (116), Expect = 1e-18 Identities = 180/260 (69%), Gaps = 1/260 (0%) Strand=Plus/Minus Query 7285 ACATGATCATCATAAATATGCTTCAGATTCATTTCATCTTGACGGAACAGCACGAGAAAG 7344 |||| ||||| ||| |||||||| ||||||||||||||||| ||| | | | | | Sbjct 9919 ACATAATCATTATAGATATGCTTAAGATTCATTTCATCTTGTTTGAATACAATTATCATG 9860 Query 7345 TTTGCATTATCTCTAATCAGGTGCTTGGGTATTCGTGTATAAGTTTGACAGAGATAGAAG 7404 |||| |||||| | ||| | || || || ||| ||||||||||||||| | ||| ||| Sbjct 9859 TTTGTATTATCACGAATTAAGTATTTAGGAATTATTGTATAAGTTTGACATAAATAAAAG 9800 Query 7405 CTGTCAACATCCTTGTGTCGACCCATGCAGAAAAAAGCTTTGATGTGATCCTGTTTTTCA 7464 |||| || || | |||||||| || ||| || || || | |||||| || Sbjct 9799 TAATCAATATTTTTATAACGACCCATACAAAAATAATCTCGTATTGTACTTTGTTTTCCA 9740 Query 7465 CAAGCAACATCGTCAAATATCATCAAGGAGTTAGGCTTAGCATCTTCAGGCTTGATTACA 7524 || ||||| | ||||| | | ||| | || || || || | |||||||| ||| Sbjct 9739 CATATTACATCACCGAATATAAAAATAGAG-TCGGTTTGGCTTCAGCGGGCTTGATAACA 9681 Query 7525 GCTTCATGTTCGCTGAATGT 7544 | || ||| || ||||| Sbjct 9680 TCAATATTTTCACTAAATGT 9661 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 97970553647524